Detailed information NTG1005157

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: FGK97_RS04320
• Genome accession: NZ_LR594037
• Coordinates: 866631..867743 (+)
• Length: 370 a.a.
• NCBI ID: WP_003024631.1
• Uniprot ID: A0A0P0N8U3
• Organism: Streptococcus anginosus strain NCTC11064
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 861631..872743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK97_RS04300 (NCTC11064_00874)	-	863494..863832 (+)	339	WP_003024641.1	ATP cone domain-containing protein	-
FGK97_RS04305 (NCTC11064_00875)	rpsU	864029..864205 (+)	177	WP_000048054.1	30S ribosomal protein S21	-
FGK97_RS04310 (NCTC11064_00876)	mscL	864318..864698 (-)	381	WP_003024637.1	large conductance mechanosensitive channel protein MscL	-
FGK97_RS04315 (NCTC11064_00877)	dnaG	864853..866628 (+)	1776	WP_282187182.1	DNA primase	-
FGK97_RS04320 (NCTC11064_00878)	rpoS	866631..867743 (+)	1113	WP_003024631.1	RNA polymerase sigma factor RpoD	Regulator
FGK97_RS04325 (NCTC11064_00879)	-	867762..868091 (+)	330	WP_003024629.1	metal-sulfur cluster assembly factor	-
FGK97_RS04330 (NCTC11064_00880)	brnQ	868239..869567 (+)	1329	WP_021001660.1	branched-chain amino acid transport system II carrier protein	-
FGK97_RS04335 (NCTC11064_00881)	ccdA2	869705..870415 (+)	711	WP_003024626.1	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	-
FGK97_RS04340 (NCTC11064_00882)	-	870429..870992 (+)	564	WP_003024623.1	redoxin domain-containing protein	-
FGK97_RS04345 (NCTC11064_00883)	msrB	871005..872123 (+)	1119	WP_041784110.1	peptide-methionine (R)-S-oxide reductase MsrB	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42439.09 Da
• Isoelectric Point: 4.4643

>NTDB_id=1005157 FGK97_RS04320 WP_003024631.1 866631..867743(+) (rpoS) [Streptococcus anginosus strain NCTC11064]
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDRLVIPFTLEADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED

Nucleotide

• Length: 1113 bp

>NTDB_id=1005157 FGK97_RS04320 WP_003024631.1 866631..867743(+) (rpoS) [Streptococcus anginosus strain NCTC11064]
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAAATCAATGATCGGCTAGTCATTCCATTTACTTTGGAAGCTGATGGCATTGAAGATCTTCTTCAAC
GGATTCAGGACGCAGGGATTGCTATTACGGATAAAGAGGGCAACCCAAGTGAACGGGTTTTAAATACAGAGGAAGAAGAA
GCTGAATTAACAGATGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTGAACGACCCTGTCCGTATGTATTTAAAGGAAAT
TGGTGTTGTTCCGTTATTGACCAATGAAGAAGAGCAAGAATTAGCTGTTCTTGTGGAGCAAGGCGACTTAGAAGCGAAAC
AACGTTTGGCAGAAGCTAATTTGCGGTTGGTTGTCTCTATTGCTAAGCGCTATGTTGGACGCGGCATGCAGTTTCTTGAC
TTGATTCAAGAAGGCAATATGGGATTGATGAAAGCCGTTGACAAGTTTGACTATACCAAAGGTTTCAAATTTTCGACCTA
TGCCACTTGGTGGATTCGTCAAGCGATTACTCGTGCGATTGCTGACCAAGCGCGTACGATTCGGATTCCGGTTCACATGG
TTGAGACAATCAATAAATTAGTGCGGGAGCAACGAAATCTTTTGCAAGAATTGGGACAAGATCCAACGCCAGAACAAATT
GCTGAGCGCATGGATATGACACCAGATAAAGTTCGTGAAATTTTGAAGATTGCCCAGGAGCCGGTCTCTCTTGAAACTCC
AATTGGAGAAGAAGATGATAGTCATCTTGGCGATTTCATTGAGGATGAAGTGATTGAAAATCCAGTTGATTACACAACAC
GTATTGTCCTACGTGAGCAATTAGACGAGGTTCTTGATACATTAACAGACCGTGAAGAAAATGTACTACGTTTGCGTTTC
GGTCTAGATGATGGTAAAATGCGTACGCTGGAAGATGTTGGAAAAGTCTTTAACGTGACTCGTGAACGGATTCGACAAAT
TGAGGCCAAAGCCCTACGCAAATTGCGTCATCCAAGTCGTAGCAAGCCACTTCGTGACTTTATTGAAGATTAG

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (215-291)

• Sigma-70 region 2 (Sigma70_r2) (136-205)

• Sigma-70, region 4 (Sigma70_r4) (304-357)

• Sigma-70 factor, region 1.1 (Sigma70_r1_1) (14-87)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (98-130)

3D structure

• AlphaFold DB: A0A0P0N8U3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	46.918	78.919	0.37