Detailed information NTG1005047

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: FGL04_RS06495
• Genome accession: NZ_LR594035
• Coordinates: 1245750..1247954 (-)
• Length: 734 a.a.
• NCBI ID: WP_138068622.1
• Uniprot ID: -
• Organism: Streptococcus pseudoporcinus strain NCTC5385
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1240750..1252954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL04_RS06465 (NCTC5385_01409)	-	1241342..1242163 (-)	822	WP_138068617.1	ZIP family metal transporter	-
FGL04_RS06470 (NCTC5385_01410)	-	1242178..1242966 (-)	789	WP_138068618.1	Nif3-like dinuclear metal center hexameric protein	-
FGL04_RS06475 (NCTC5385_01411)	-	1242956..1243642 (-)	687	WP_007893404.1	tRNA (adenine(22)-N(1))-methyltransferase	-
FGL04_RS06480 (NCTC5385_01412)	nth	1243712..1244362 (-)	651	WP_138068619.1	endonuclease III	-
FGL04_RS06485 (NCTC5385_01413)	-	1244359..1245042 (-)	684	WP_138068620.1	DnaD domain-containing protein	-
FGL04_RS06490 (NCTC5385_01414)	-	1245106..1245624 (-)	519	WP_138068621.1	adenine phosphoribosyltransferase	-
FGL04_RS06495 (NCTC5385_01415)	recJ	1245750..1247954 (-)	2205	WP_138068622.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
FGL04_RS06500 (NCTC5385_01416)	-	1247951..1248715 (-)	765	WP_138068623.1	SDR family NAD(P)-dependent oxidoreductase	-
FGL04_RS06505 (NCTC5385_01417)	rnz	1248712..1249644 (-)	933	WP_138068624.1	ribonuclease Z	-
FGL04_RS06510 (NCTC5385_01418)	-	1249650..1250291 (-)	642	WP_138068625.1	cystathionine beta-lyase	-
FGL04_RS06515 (NCTC5385_01419)	hflX	1250284..1251522 (-)	1239	WP_138068626.1	GTPase HflX	-
FGL04_RS06520 (NCTC5385_01420)	miaA	1251613..1252503 (-)	891	WP_138068627.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
FGL04_RS06525 (NCTC5385_01421)	-	1252637..1252813 (+)	177	WP_138068628.1	DUF3042 family protein	-

Sequence

Protein

• Length: 734 a.a.
• Molecular weight: 82113.19 Da
• Isoelectric Point: 4.4499

>NTDB_id=1005047 FGL04_RS06495 WP_138068622.1 1245750..1247954(-) (recJ) [Streptococcus pseudoporcinus strain NCTC5385]
MIKAKYQWEIQEEKPDSGFFQLAKKEGLSPESAQILYERGIQTPEQVEAFLHADLSQLHDPYLLNDMEKAVTRIRLAIEK
GETILVYGDYDADGMTSASIMKETLEMMGAEVRVYLPNRFTDGYGPNLSVYKYFIQQEAISLIITVDNGVSGHDAIAFAQ
AQGVDVIVTDHHGLPDTLPEAFAIIHPEHPDADYPFKYLAGCGLAFKLATALLEEVPAEFLDLVAIGTVADMVSLQDENR
ILVKNGLSILRQTERLGLQELMALADVDLDQFNEDVIGFKIAPQLNALGRLDDPNPAIDLLTGFDEEEALAIAELINLKN
EERKTLVQTIYDEALQMVDLSKPVQVLAKEGWHPGVLGIVAGRIMEEISQTVIVLNCEDGYAKGSARSIDAINIFEALNA
KRELMTAFGGHAGAAGMTLPVDNLDALSQALSEFIEENQIDCNQKNSLTVDAILDLEHLSIDLLRSLQSIGPFGMGNPKP
VFLVKDFQLGQARTLGSHNAHLKLRLQKGPVAIDLLAFNQGHLLQDFQQARGLELVVTLSVNSWNGKTTLQLMLVDARVT
GLQLIDIRAKSAGIPERVPLYSEDPFNEEIVLDKVPDDQMTLKKVFQKQDYKQIYFKNIIEKPYYLTGYGSKEQFARLYK
TIYQFPEFDVRFKLQELSDYLKIDKILLVKMIQIFQELDFVTISDGLMSVNKDATKRDIAESRIYQDLKSLVKFQELMAL
ARPEDIYAFLMGLD

Nucleotide

• Length: 2205 bp

>NTDB_id=1005047 FGL04_RS06495 WP_138068622.1 1245750..1247954(-) (recJ) [Streptococcus pseudoporcinus strain NCTC5385]
ATGATAAAAGCGAAGTATCAATGGGAAATACAAGAAGAGAAGCCAGATTCTGGCTTTTTTCAACTTGCCAAAAAAGAAGG
ATTATCCCCAGAAAGCGCACAAATTCTTTATGAGCGTGGGATTCAGACACCTGAGCAAGTAGAGGCCTTCTTACATGCTG
ATTTATCCCAGTTACATGATCCCTATTTGCTTAATGATATGGAAAAAGCTGTGACCAGAATCCGACTAGCCATTGAAAAG
GGCGAAACGATTTTAGTCTATGGTGATTATGACGCAGATGGTATGACTTCAGCTTCTATCATGAAAGAAACCCTTGAAAT
GATGGGAGCTGAGGTAAGGGTTTACCTACCAAATCGTTTTACGGACGGCTATGGGCCCAACCTTAGCGTTTACAAGTATT
TTATCCAGCAGGAAGCTATCTCTCTCATTATAACAGTTGATAATGGTGTTTCTGGTCATGATGCAATAGCTTTCGCGCAA
GCCCAGGGAGTTGATGTTATCGTGACGGATCATCATGGTCTTCCCGATACTTTGCCAGAAGCCTTCGCGATTATCCATCC
AGAGCATCCGGACGCTGATTACCCTTTTAAATACCTAGCTGGCTGTGGCCTTGCTTTCAAATTAGCAACAGCTCTGCTAG
AAGAGGTTCCGGCAGAATTTTTAGATTTGGTCGCAATTGGAACAGTAGCTGATATGGTTAGTCTTCAGGACGAAAATCGT
ATTTTGGTTAAAAATGGTCTGTCTATTTTACGTCAGACTGAGCGGCTTGGTCTTCAAGAATTAATGGCCTTAGCTGATGT
GGATCTTGATCAATTTAATGAAGATGTTATTGGCTTTAAAATTGCACCTCAGTTAAATGCTTTAGGCCGTCTTGACGATC
CTAATCCGGCCATTGACTTATTAACTGGATTTGATGAAGAAGAAGCTCTAGCTATTGCTGAACTGATTAACCTTAAAAAT
GAGGAACGAAAGACACTTGTTCAAACCATTTATGATGAAGCTTTACAAATGGTTGATCTTAGTAAGCCTGTTCAGGTTCT
GGCAAAAGAAGGCTGGCACCCAGGTGTTTTGGGGATAGTTGCTGGTCGCATTATGGAGGAGATTAGTCAGACTGTTATTG
TTTTAAATTGTGAAGATGGTTACGCTAAAGGTTCAGCTCGTAGCATTGATGCAATCAACATTTTTGAAGCCTTAAATGCT
AAGCGGGAATTGATGACAGCATTTGGAGGTCATGCTGGGGCAGCTGGAATGACTTTGCCTGTCGACAATTTAGACGCTTT
GTCCCAGGCACTTAGTGAGTTTATTGAAGAAAATCAAATTGATTGTAACCAAAAAAATAGCTTAACTGTTGATGCTATCT
TAGATTTAGAGCATTTATCGATAGACCTCTTAAGAAGTCTACAGAGTATTGGTCCATTTGGTATGGGAAATCCTAAGCCC
GTTTTTCTAGTAAAAGATTTTCAACTAGGTCAAGCTAGAACTCTAGGAAGCCATAATGCTCATCTCAAGCTTCGGCTTCA
AAAAGGCCCTGTAGCAATTGATCTCTTAGCCTTCAACCAAGGGCATTTACTACAAGATTTTCAACAAGCGAGAGGCTTAG
AACTTGTAGTAACCTTATCTGTTAACTCTTGGAATGGTAAGACCACTTTGCAATTGATGTTGGTAGATGCACGGGTTACT
GGCCTCCAGTTGATTGATATTCGTGCTAAAAGTGCAGGCATACCAGAGAGAGTACCGCTATATTCTGAAGACCCTTTCAA
TGAGGAAATTGTCCTTGATAAGGTTCCTGATGATCAGATGACTTTAAAAAAGGTTTTTCAAAAACAAGATTACAAGCAGA
TTTACTTTAAAAACATCATTGAGAAACCTTATTATTTAACAGGTTATGGCAGTAAGGAGCAATTTGCTCGCCTTTATAAA
ACGATATATCAATTCCCTGAGTTTGATGTGCGTTTTAAATTACAAGAATTGAGTGACTACTTGAAAATTGACAAAATCTT
GTTGGTGAAAATGATTCAAATTTTCCAAGAGTTGGATTTTGTAACGATTAGTGATGGCCTAATGTCAGTTAATAAAGATG
CTACTAAGAGAGACATTGCTGAAAGTCGCATTTATCAAGACTTAAAAAGCTTGGTTAAATTTCAAGAATTGATGGCGCTA
GCAAGACCAGAAGACATTTATGCATTTTTGATGGGACTGGATTAG

Domains

Predicted by InterProScan.

• DHHA1 domain (DHHA1) (319-435)

• RecJ OB domain (RecJ_OB) (450-556)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-721)

• DHH family (DHH) (83-228)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	62.958	100	0.632
recJ	Bacillus subtilis subsp. subtilis str. 168	35.954	100	0.38