Detailed information NTG1005037

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: FGL04_RS04760
• Genome accession: NZ_LR594035
• Coordinates: 891852..893951 (-)
• Length: 699 a.a.
• NCBI ID: WP_138068393.1
• Uniprot ID: -
• Organism: Streptococcus pseudoporcinus strain NCTC5385
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 886852..898951

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL04_RS04730 (NCTC5385_01025)	-	887283..888122 (+)	840	WP_138068390.1	thymidylate synthase	-
FGL04_RS04735 (NCTC5385_01026)	-	888202..888699 (+)	498	WP_007894152.1	dihydrofolate reductase	-
FGL04_RS04745 (NCTC5385_01028)	clpX	888925..890154 (+)	1230	WP_138069156.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FGL04_RS04750 (NCTC5385_01029)	yihA	890167..890766 (+)	600	WP_138068391.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
FGL04_RS04755 (NCTC5385_01030)	-	890888..891604 (+)	717	WP_138068392.1	hypothetical protein	-
FGL04_RS04760 (NCTC5385_01031)	clpE	891852..893951 (-)	2100	WP_138068393.1	AAA family ATPase	Regulator
FGL04_RS04765 (NCTC5385_01033)	rplJ	894356..894856 (+)	501	WP_138068394.1	50S ribosomal protein L10	-
FGL04_RS04770	rplL	894922..895287 (+)	366	WP_138068395.1	50S ribosomal protein L7/L12	-
FGL04_RS11270	-	895654..896476 (-)	823	Protein_932	transposase	-
FGL04_RS04785	-	896680..897837 (-)	1158	Protein_933	IS110 family transposase	-
FGL04_RS04790 (NCTC5385_01039)	-	898009..898878 (-)	870	Protein_934	IS3 family transposase	-

Sequence

Protein

• Length: 699 a.a.
• Molecular weight: 77486.78 Da
• Isoelectric Point: 5.6027

>NTDB_id=1005037 FGL04_RS04760 WP_138068393.1 891852..893951(-) (clpE) [Streptococcus pseudoporcinus strain NCTC5385]
MTKNYGRDSFGNMDDIFNQLMGNIGGYQTENRRYLINGREMTPEEFNHYRQTGKIPNQISNETGHSKKQAASNGILEKLG
TNLTEEARKGNLDPVIGRNKEIQDTAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVAGDVPTAIKGKEIISIDISSL
EAGTQYRGSFEENIQQLITEVKESGNIVLFFDEIHQILGAGSTGGESGSKGLADILKPALSRGEITVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPNAEDTFHILMGIRNLYEQHHNVILPDSVLKAAVDYSIQYIPQRSLPDKAIDLLDMTAAHLAA
QHPATDLQSLEKEIETQKKAQEQAVEKEDFEAALKAKTRIEELQKQIENHTEGQKVTANINDIAQSVERLTGIPVSKMGA
SDLERLKEIASRLKAHVIGQDQAVSAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSKESIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNKNTLTEKVRRNPYAIILLDEIEKADSQVITLLLQFLDDGRLTDGQGNTIDFKNT
VIIATSNAGFGYEHNLDKQNKEIPIMDRLAPYFRPEFLNRFNALIEFKSLTKDDLKAIVNLMLAEVDKTIVKKGITLEVD
DDVKDHLIELGYDPIMGVRPLRRVIEQEIRDNITDYYLDHPEAKKLHAQLKNGKITITL

Nucleotide

• Length: 2100 bp

>NTDB_id=1005037 FGL04_RS04760 WP_138068393.1 891852..893951(-) (clpE) [Streptococcus pseudoporcinus strain NCTC5385]
ATGACAAAAAATTATGGAAGAGATTCTTTTGGAAATATGGATGATATTTTCAATCAACTAATGGGAAATATTGGTGGTTA
CCAGACAGAAAATCGTCGCTATTTGATCAATGGTCGTGAGATGACTCCGGAAGAGTTCAATCACTATCGCCAAACTGGTA
AGATACCAAATCAAATAAGTAATGAGACTGGCCATTCTAAAAAACAAGCGGCTAGTAACGGTATTTTGGAAAAATTAGGA
ACCAATCTAACGGAAGAAGCTCGCAAAGGAAATCTAGATCCTGTTATTGGACGCAATAAGGAAATTCAAGATACTGCTGA
AATTCTATCTCGACGAACAAAAAATAATCCTGTTCTTGTTGGTGATGCGGGAGTTGGAAAAACTGCTGTTGTTGAAGGCT
TAGCTCAAGCTATTGTAGCTGGGGATGTCCCAACTGCGATTAAAGGGAAAGAAATCATTTCAATTGATATTTCTAGTCTA
GAAGCAGGTACCCAATATCGTGGTAGTTTTGAAGAAAATATTCAGCAGTTAATTACTGAAGTTAAAGAATCAGGTAATAT
TGTCCTATTCTTTGATGAAATTCACCAAATTTTAGGAGCAGGCTCTACAGGTGGTGAATCTGGATCTAAAGGTTTAGCTG
ATATCCTTAAACCCGCCTTATCACGTGGAGAAATAACAGTCATCGGTGCGACAACTCAAGATGAATATCGAAATACTATC
CTTAAAAATGCTGCTTTAGCAAGACGCTTTAATGAAGTTAAGGTCAATGCTCCAAATGCTGAGGACACTTTCCATATCTT
AATGGGAATACGAAATCTCTATGAACAACATCATAATGTTATTCTTCCCGACTCCGTATTAAAGGCAGCAGTTGATTATT
CTATCCAGTATATTCCACAGCGTAGCCTCCCTGATAAGGCTATTGATTTATTAGATATGACAGCTGCACATTTAGCTGCC
CAACATCCAGCGACAGATCTTCAATCCCTCGAAAAAGAAATTGAAACACAAAAAAAGGCTCAAGAACAGGCTGTAGAAAA
AGAAGATTTTGAAGCAGCTCTCAAAGCAAAAACTAGAATTGAAGAATTGCAAAAACAGATTGAAAACCATACAGAAGGTC
AAAAAGTGACTGCCAATATTAATGACATCGCTCAATCTGTTGAACGACTAACCGGAATCCCTGTTTCCAAGATGGGCGCA
AGTGATTTAGAACGTCTAAAAGAAATTGCTAGCCGCTTAAAAGCACATGTCATCGGTCAAGATCAAGCTGTTTCTGCGGT
TGCAAGAGCTATTCGTCGGAACCGGGCTGGCTTTGATGATGGGAATCGTCCCATTGGATCCTTCTTATTTGTAGGGCCGA
CTGGGGTTGGGAAAACTGAACTCGCAAAACAGCTCGCGCTTGATATGTTTGGATCTAAAGAGTCCATTATAAGATTAGAT
ATGTCAGAATACAGTGACCGAACAGCTGTTTCAAAATTAATTGGTACTACTGCTGGTTATGTGGGCTATGATGATAACAA
AAATACCTTAACTGAGAAAGTACGTCGTAATCCCTATGCCATTATCCTTTTGGACGAAATTGAAAAAGCTGACTCACAAG
TTATTACGCTCTTACTTCAATTTTTAGATGATGGTCGTCTGACAGATGGACAGGGAAATACCATTGACTTCAAAAATACT
GTTATTATTGCCACATCCAATGCTGGATTTGGTTATGAGCATAACCTTGACAAGCAAAACAAAGAAATACCGATCATGGA
TCGACTTGCGCCCTACTTTAGACCAGAATTTCTTAATAGATTCAATGCTCTTATAGAATTCAAGAGTTTGACAAAAGATG
ATCTGAAAGCTATCGTCAATCTGATGTTAGCCGAAGTTGATAAGACGATTGTAAAAAAAGGAATCACATTAGAAGTAGAT
GACGATGTTAAAGATCACCTAATTGAGCTTGGCTATGATCCAATAATGGGAGTTCGTCCACTTAGACGTGTTATCGAACA
AGAAATTCGTGACAATATTACAGATTACTACTTAGACCATCCTGAAGCCAAAAAACTCCATGCTCAGTTGAAAAATGGAA
AGATTACCATTACTCTATAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (610-681)

• AAA lid domain (AAA_lid_9) (260-355)

• ATPase family associated with various cellular activities (AAA) (AAA) (118-250)

• AAA domain (Cdc48 subfamily) (AAA_2) (443-602)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	50.711	90.558	0.459
clpE	Streptococcus pneumoniae TIGR4	49.224	92.132	0.454
clpE	Streptococcus pneumoniae Rx1	49.224	92.132	0.454
clpE	Streptococcus pneumoniae D39	49.224	92.132	0.454
clpE	Streptococcus pneumoniae R6	49.224	92.132	0.454
clpC	Lactococcus lactis subsp. cremoris KW2	50.079	90.558	0.454
clpC	Bacillus subtilis subsp. subtilis str. 168	45.101	91.989	0.415
clpC	Streptococcus pneumoniae TIGR4	42.383	94.85	0.402
clpC	Streptococcus pneumoniae Rx1	42.383	94.85	0.402
clpC	Streptococcus pneumoniae D39	42.383	94.85	0.402
clpC	Streptococcus mutans UA159	42.188	91.559	0.386
clpC	Streptococcus thermophilus LMD-9	43.408	88.984	0.386
clpC	Streptococcus thermophilus LMG 18311	43.248	88.984	0.385
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	40.582	93.419	0.379