Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   FGL00_RS07655 Genome accession   NZ_LR594034
Coordinates   1514648..1515310 (-) Length   220 a.a.
NCBI ID   WP_138098650.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1509648..1520310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL00_RS07635 (NCTC8546_01588) - 1511119..1511487 (-) 369 WP_003057106.1 metalloregulator ArsR/SmtB family transcription factor -
  FGL00_RS11055 (NCTC8546_01589) - 1511690..1511854 (+) 165 Protein_1452 DUF5960 family protein -
  FGL00_RS07645 (NCTC8546_01591) - 1512199..1512834 (-) 636 WP_115261962.1 CpXC domain-containing protein -
  FGL00_RS07650 (NCTC8546_01592) - 1512988..1514667 (-) 1680 Protein_1454 ComEC/Rec2 family competence protein -
  FGL00_RS07655 (NCTC8546_01593) comEA 1514648..1515310 (-) 663 WP_138098650.1 helix-hairpin-helix domain-containing protein Machinery gene
  FGL00_RS07660 (NCTC8546_01594) - 1515707..1516447 (-) 741 WP_003062277.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  FGL00_RS07665 (NCTC8546_01595) - 1516565..1517341 (+) 777 WP_115283569.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  FGL00_RS07670 (NCTC8546_01596) - 1517331..1517609 (+) 279 WP_003061674.1 GIY-YIG nuclease family protein -
  FGL00_RS07675 (NCTC8546_01597) - 1517633..1519633 (-) 2001 WP_003061221.1 potassium transporter Kup -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 24081.40 Da        Isoelectric Point: 5.1772

>NTDB_id=1004952 FGL00_RS07655 WP_138098650.1 1514648..1515310(-) (comEA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
MIDDLLTKGTNSLKKVYSLPRLIGVVLAIFLILTLSFVIWGKEQSQTKLPIVSTSSSIQQPASEEKKYSSEESNILVDLK
GAVQQEGVYELRANSRVRDVIELAGGLTQEADRHAVNFAEKLVDEQVVYVAKQGEDISVLPNASSAGKANAEMSNSTKVN
INKANLEELQRISGIGVKRAQDILETRDSLGGFKTLDDLRQVSGIGEKTLEKLKHELSLD

Nucleotide


Download         Length: 663 bp        

>NTDB_id=1004952 FGL00_RS07655 WP_138098650.1 1514648..1515310(-) (comEA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
ATGATAGATGACTTGTTAACTAAAGGAACAAATAGCTTGAAAAAGGTTTATTCTCTGCCACGCTTGATTGGTGTTGTGCT
AGCCATTTTTCTGATACTAACCCTAAGTTTTGTTATCTGGGGCAAAGAGCAGAGCCAAACAAAACTTCCTATTGTATCAA
CTTCTTCTTCCATACAACAGCCAGCTAGTGAGGAAAAAAAGTATTCTTCAGAAGAGAGTAATATTTTAGTGGATTTAAAA
GGAGCCGTACAACAGGAGGGAGTTTATGAGCTCAGGGCTAATAGCCGTGTGCGCGATGTCATTGAATTAGCTGGGGGACT
TACTCAGGAAGCTGATAGACATGCTGTTAATTTTGCAGAAAAACTGGTGGATGAGCAGGTTGTGTATGTGGCTAAGCAGG
GTGAAGACATTTCTGTCTTGCCAAATGCCTCCTCAGCAGGTAAAGCTAACGCAGAAATGTCTAACTCAACAAAGGTGAAT
ATCAATAAAGCAAATTTAGAGGAGTTACAACGTATTTCGGGCATTGGTGTAAAAAGGGCTCAGGATATTCTTGAGACGAG
AGACAGTCTAGGTGGCTTTAAAACGTTAGATGATCTTAGACAGGTATCTGGAATTGGTGAAAAAACACTTGAGAAATTGA
AACATGAACTATCGTTGGACTAA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(77-129)

Helix-hairpin-helix motif (HHH_3)

(155-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Bacillus subtilis subsp. subtilis str. 168

38.863

95.909

0.373