Detailed information NTG1004947

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: FGL00_RS06520
• Genome accession: NZ_LR594034
• Coordinates: 1277021..1279228 (-)
• Length: 735 a.a.
• NCBI ID: WP_138083901.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1272021..1284228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL00_RS06490 (NCTC8546_01351)	-	1272417..1273238 (-)	822	WP_138083899.1	ZIP family metal transporter	-
FGL00_RS06495 (NCTC8546_01352)	-	1273256..1274044 (-)	789	WP_003054664.1	Nif3-like dinuclear metal center hexameric protein	-
FGL00_RS06500 (NCTC8546_01353)	-	1274034..1274720 (-)	687	WP_012767134.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	-
FGL00_RS06505 (NCTC8546_01354)	nth	1274801..1275457 (-)	657	WP_003054655.1	endonuclease III	-
FGL00_RS06510 (NCTC8546_01355)	-	1275454..1276137 (-)	684	WP_022554834.1	DnaD domain-containing protein	-
FGL00_RS06515 (NCTC8546_01356)	-	1276355..1276873 (-)	519	WP_003054649.1	adenine phosphoribosyltransferase	-
FGL00_RS06520 (NCTC8546_01357)	recJ	1277021..1279228 (-)	2208	WP_138083901.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
FGL00_RS06525 (NCTC8546_01358)	-	1279225..1279989 (-)	765	WP_138083902.1	SDR family oxidoreductase	-
FGL00_RS06530 (NCTC8546_01359)	rnz	1279989..1280918 (-)	930	WP_138083903.1	ribonuclease Z	-
FGL00_RS06535 (NCTC8546_01360)	-	1280933..1281568 (-)	636	WP_012767138.1	cystathionine beta-lyase	-
FGL00_RS06540 (NCTC8546_01361)	hflX	1281561..1282799 (-)	1239	WP_065957069.1	GTPase HflX	-
FGL00_RS06545 (NCTC8546_01362)	miaA	1282887..1283771 (-)	885	WP_003057843.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
FGL00_RS06550 (NCTC8546_01363)	-	1283904..1284080 (+)	177	WP_003057835.1	DUF3042 family protein	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 82091.84 Da
• Isoelectric Point: 4.6429

>NTDB_id=1004947 FGL00_RS06520 WP_138083901.1 1277021..1279228(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYERGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLTMLKHTERVGLQELMSLSSIDLDQFTEDAAGFQIAPQLNALGRLDDPNPAIELLTGFDDQEAQAIALMIKEKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMEAIGQTVIVLAIDNGFAKGSARSLEAINIFEALSG
NRDLFTAFGGHAGAAGMTLPVDNLEALSDLLCQFVIERGLDQTAKNTLTIDERLSLEDLSLDTLKSLDKLAPYGMDHPKP
IFYVKDIKVSQARTMGQDQSHLKFKVSQGKTSFDVLAFGQGSQLQDFQQATGLELAVTLSVNHWNGNTSLQLMLVDARVE
GVQLLDLRSKTAKLPEGIPTIEEDPNATVIVIKELPESFKDWRHQFADRTFDAIYFKNQIKHPYYLTGFGSREQFAKLYK
TIYQFPEFDVRHKLTDLSRYLNIDKLLLIKLIQIFEELAFVTIEDGLMTVNPQAQKRDISESRIYQELKELVKFQEIMAL
ASPQEMYDYLVNSKP

Nucleotide

• Length: 2208 bp

>NTDB_id=1004947 FGL00_RS06520 WP_138083901.1 1277021..1279228(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATCTATGAGCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCACCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCTGATATGGTAAGCTTGACAGGTGAAAACCGT
GTCTTGGTCAAAAATGGCTTGACCATGCTAAAACACACTGAAAGAGTGGGGTTGCAGGAACTGATGTCCTTGTCTTCTAT
TGATTTGGACCAATTTACGGAAGATGCTGCTGGGTTTCAGATTGCTCCCCAGTTGAATGCCTTAGGTCGTTTAGATGATC
CTAATCCAGCTATTGAGCTACTGACGGGCTTTGATGATCAAGAAGCCCAAGCGATTGCCTTGATGATTAAGGAAAAAAAT
GAAGAGCGTAAGGCTTTGGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCAGTTCAAGTCTT
AGCTCAAGCTGGTTGGCATCCAGGTGTGCTAGGTATTGTAGCGGGTCGCATTATGGAAGCCATTGGACAGACGGTCATTG
TCTTAGCTATTGATAACGGTTTTGCGAAAGGCTCGGCCAGAAGTTTAGAGGCCATTAATATATTTGAAGCCTTAAGTGGG
AATCGTGATCTTTTTACAGCTTTCGGTGGACATGCTGGTGCAGCTGGGATGACTTTGCCCGTGGATAATTTAGAAGCTTT
ATCGGACTTGCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCTAAAAATACGTTAACTATTGATGAAAGGC
TGTCTTTGGAGGATCTTAGTCTTGATACTTTAAAGAGTTTGGACAAACTAGCCCCCTATGGGATGGATCATCCTAAGCCA
ATCTTTTATGTTAAGGATATTAAAGTTAGTCAAGCGCGTACCATGGGTCAAGACCAGAGTCATCTTAAATTCAAAGTCAG
CCAGGGTAAGACCTCCTTTGATGTTCTGGCTTTTGGTCAAGGAAGCCAACTACAAGACTTTCAACAAGCTACTGGTTTAG
AGTTAGCGGTAACTTTATCCGTCAACCACTGGAACGGCAATACCAGCCTCCAACTAATGTTGGTTGACGCTCGTGTTGAA
GGGGTGCAGTTGCTTGATTTACGGTCAAAAACAGCTAAACTACCCGAAGGTATTCCGACGATTGAGGAAGATCCCAATGC
AACAGTTATTGTTATTAAAGAGCTTCCAGAGTCTTTTAAAGACTGGCGTCATCAGTTCGCTGATAGAACCTTCGATGCCA
TTTATTTTAAAAATCAGATTAAACACCCCTATTACCTAACAGGTTTTGGAAGTCGTGAACAGTTTGCTAAACTCTATAAA
ACCATTTACCAATTTCCAGAATTTGATGTGCGTCATAAATTGACTGACTTGAGTCGCTACTTAAACATTGACAAACTTTT
ATTGATTAAGCTCATTCAGATTTTTGAAGAGCTAGCTTTTGTGACGATTGAAGATGGCCTGATGACAGTTAACCCACAAG
CGCAAAAGCGAGATATTTCTGAGAGTCGTATCTACCAAGAGCTAAAAGAACTCGTGAAGTTCCAAGAAATCATGGCCTTG
GCCAGTCCTCAAGAAATGTATGATTATTTGGTCAATTCGAAACCATAA

Domains

Predicted by InterProScan.

• DHH family (DHH) (83-228)

• DHHA1 domain (DHHA1) (317-435)

• RecJ OB domain (RecJ_OB) (450-556)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	64.189	100	0.646
recJ	Bacillus subtilis subsp. subtilis str. 168	35.98	100	0.382