Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   FGL00_RS06455 Genome accession   NZ_LR594034
Coordinates   1266611..1267090 (-) Length   159 a.a.
NCBI ID   WP_003058929.1    Uniprot ID   A0ABU0AAE0
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1261611..1272090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL00_RS06435 (NCTC8546_01340) - 1261908..1262251 (-) 344 Protein_1209 hypothetical protein -
  FGL00_RS06440 (NCTC8546_01341) - 1262429..1264081 (+) 1653 WP_065354957.1 NFACT family protein -
  FGL00_RS06445 (NCTC8546_01342) - 1264144..1265391 (-) 1248 WP_084916566.1 tetratricopeptide repeat protein -
  FGL00_RS06450 (NCTC8546_01343) - 1265381..1266562 (-) 1182 WP_138098531.1 AI-2E family transporter -
  FGL00_RS06455 (NCTC8546_01344) mutX 1266611..1267090 (-) 480 WP_003058929.1 8-oxo-dGTP diphosphatase Machinery gene
  FGL00_RS06460 (NCTC8546_01345) - 1267286..1267477 (+) 192 WP_003058922.1 hypothetical protein -
  FGL00_RS11030 (NCTC8546_01346) - 1267565..1268290 (-) 726 WP_172600561.1 type II CAAX endopeptidase family protein -
  FGL00_RS06470 (NCTC8546_01347) rfbB 1268479..1269522 (-) 1044 WP_044565428.1 dTDP-glucose 4,6-dehydratase -
  FGL00_RS06475 (NCTC8546_01348) - 1269766..1270359 (-) 594 WP_003057688.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  FGL00_RS06480 (NCTC8546_01349) rfbA 1270359..1271228 (-) 870 WP_003057684.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18574.75 Da        Isoelectric Point: 4.2471

>NTDB_id=1004946 FGL00_RS06455 WP_003058929.1 1266611..1267090(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=1004946 FGL00_RS06455 WP_003058929.1 1266611..1267090(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGAGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686