Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ABH214_RS09095 Genome accession   NZ_CP157233
Coordinates   1657104..1657730 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain 2024CK-00476     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1652104..1662730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABH214_RS09075 (ABH214_09080) - 1652503..1654263 (-) 1761 WP_023305819.1 Lon protease family protein -
  ABH214_RS09080 (ABH214_09085) matP 1654450..1654902 (+) 453 WP_063147651.1 macrodomain Ter protein MatP -
  ABH214_RS09085 (ABH214_09090) ompA 1654968..1656020 (-) 1053 WP_017694761.1 porin OmpA -
  ABH214_RS09090 (ABH214_09095) sulA 1656377..1656886 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  ABH214_RS09095 (ABH214_09100) sxy/tfoX 1657104..1657730 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  ABH214_RS09100 (ABH214_09105) yccS 1657687..1659849 (-) 2163 WP_063147650.1 YccS family putative transporter -
  ABH214_RS09105 (ABH214_09110) - 1659868..1660314 (-) 447 WP_022647660.1 YccF domain-containing protein -
  ABH214_RS09110 (ABH214_09115) helD 1660437..1662491 (+) 2055 WP_063147649.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=1004945 ABH214_RS09095 WP_023315767.1 1657104..1657730(+) (sxy/tfoX) [Enterobacter hormaechei strain 2024CK-00476]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1004945 ABH214_RS09095 WP_023315767.1 1657104..1657730(+) (sxy/tfoX) [Enterobacter hormaechei strain 2024CK-00476]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGTGAAATTCATCATCGCGCACT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTATTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572


Multiple sequence alignment