Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   FGK95_RS06225 Genome accession   NZ_LR590625
Coordinates   1221631..1222110 (-) Length   159 a.a.
NCBI ID   WP_093998940.1    Uniprot ID   A0A3P5YBD5
Organism   Streptococcus canis strain B700072     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1216631..1227110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK95_RS11085 (SAMEA5186854_01259) - 1216719..1217276 (-) 558 WP_168866129.1 IS110 family transposase -
  FGK95_RS06210 (SAMEA5186854_01260) fbp54 1217461..1219113 (+) 1653 WP_093998942.1 Rqc2 family fibronectin-binding protein Fbp54 -
  FGK95_RS06215 (SAMEA5186854_01261) - 1219169..1220416 (-) 1248 WP_093998941.1 tetratricopeptide repeat protein -
  FGK95_RS06220 (SAMEA5186854_01262) - 1220406..1221587 (-) 1182 WP_003043899.1 AI-2E family transporter -
  FGK95_RS06225 (SAMEA5186854_01263) mutX 1221631..1222110 (-) 480 WP_093998940.1 NUDIX hydrolase Machinery gene
  FGK95_RS06230 (SAMEA5186854_01264) - 1222199..1223218 (+) 1020 WP_138114200.1 lactonase family protein -
  FGK95_RS06235 (SAMEA5186854_01265) - 1223274..1223465 (+) 192 WP_093998938.1 hypothetical protein -
  FGK95_RS06240 (SAMEA5186854_01266) rfbB 1223842..1224888 (-) 1047 WP_093998937.1 dTDP-glucose 4,6-dehydratase -
  FGK95_RS06245 (SAMEA5186854_01267) - 1225116..1225709 (-) 594 WP_093998936.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  FGK95_RS06250 (SAMEA5186854_01268) rfbA 1225709..1226578 (-) 870 WP_003043910.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18732.03 Da        Isoelectric Point: 4.3727

>NTDB_id=1004840 FGK95_RS06225 WP_093998940.1 1221631..1222110(-) (mutX) [Streptococcus canis strain B700072]
MTQLATICYIDNGDALLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTEFEGELISDEESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYDQNNQLIDKSVTFYK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=1004840 FGK95_RS06225 WP_093998940.1 1221631..1222110(-) (mutX) [Streptococcus canis strain B700072]
ATGACCCAATTAGCAACCATTTGTTACATAGATAATGGCGATGCTTTGCTGTTGTTGCACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGCAAGTGGATTTCCGTTGGGGGTAAGCTTGAAGCAGGTGAAACCCCAGACGAGTGTGCCCGCCGTGAAA
TTTTAGAAGAAACTCATTTGACGGTTAAAAAAATGGATTTTAAGGGAATGATTACTTTCCCAGAATTTACCCCTGGTCAT
GATTGGTACACCTATGTGTTTAAAGTAACCGAGTTTGAAGGAGAACTAATCTCAGATGAAGAATCCCGGGAAGGGACCTT
GGAATGGGTGCCTTACGATCAGGTATTGGAAAAACCAACCTGGGAAGGGGACTATGACATTTTTAAATGGATTTTAGAAG
ACCGTCCTTTTTTCTCTGCCAAATTTACTTACGACCAAAACAACCAACTCATTGATAAATCCGTGACGTTTTATAAATGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3P5YBD5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

100

0.711

Multiple sequence alignment