Detailed information NTG1004735

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABI116_RS06240
• Genome accession: NZ_CP157214
• Coordinates: 1206192..1207145 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis subsp. subtilis isolate FELIX_MS21
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1201192..1212145

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABI116_RS06215 (ABI116_06215)	argF	1203024..1203983 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
ABI116_RS06220 (ABI116_06220)	yjzC	1204069..1204248 (+)	180	WP_003245356.1	YjzC family protein	-
ABI116_RS06225 (ABI116_06225)	yjzD	1204294..1204479 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
ABI116_RS06230 (ABI116_06230)	-	1204728..1205462 (+)	735	WP_003245223.1	hypothetical protein	-
ABI116_RS06235 (ABI116_06235)	-	1205544..1206101 (+)	558	WP_003232974.1	hypothetical protein	-
ABI116_RS06240 (ABI116_06240)	med	1206192..1207145 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
ABI116_RS06245 (ABI116_06245)	comZ	1207160..1207351 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ABI116_RS06250 (ABI116_06250)	yjzB	1207381..1207620 (-)	240	WP_003232972.1	spore coat protein YjzB	-
ABI116_RS06255 (ABI116_06255)	fabH	1207785..1208723 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
ABI116_RS06260 (ABI116_06260)	fabF	1208746..1209987 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
ABI116_RS06265 (ABI116_06265)	yjaZ	1210063..1210848 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
ABI116_RS06270 (ABI116_06270)	appD	1211040..1212026 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=1004735 ABI116_RS06240 WP_003245494.1 1206192..1207145(+) (med) [Bacillus subtilis subsp. subtilis isolate FELIX_MS21]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1004735 ABI116_RS06240 WP_003245494.1 1206192..1207145(+) (med) [Bacillus subtilis subsp. subtilis isolate FELIX_MS21]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1