Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABI122_RS06165 Genome accession   NZ_CP157205
Coordinates   1184955..1185131 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis strain 9.1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1179955..1190131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABI122_RS06145 (ABI122_06145) clpC 1180286..1182886 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  ABI122_RS06150 (ABI122_06150) - 1182925..1183107 (-) 183 WP_001211116.1 YjzD family protein -
  ABI122_RS06155 (ABI122_06155) - 1183264..1183998 (+) 735 WP_000028712.1 hydrolase -
  ABI122_RS06160 (ABI122_06160) - 1184028..1184900 (+) 873 WP_130055618.1 NAD(P)-dependent oxidoreductase -
  ABI122_RS06165 (ABI122_06165) comZ 1184955..1185131 (+) 177 WP_001986215.1 ComZ family protein Regulator
  ABI122_RS06170 (ABI122_06170) fabH 1185838..1186770 (+) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  ABI122_RS06175 (ABI122_06175) fabF 1186802..1188040 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  ABI122_RS06180 (ABI122_06180) - 1188147..1188935 (+) 789 WP_000513279.1 DUF2268 domain-containing putative Zn-dependent protease -
  ABI122_RS06185 (ABI122_06185) - 1189079..1189825 (+) 747 WP_000966127.1 YjbA family protein -
  ABI122_RS06190 (ABI122_06190) - 1189848..1189985 (-) 138 WP_001233403.1 hypothetical protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=1004628 ABI122_RS06165 WP_001986215.1 1184955..1185131(+) (comZ) [Bacillus thuringiensis strain 9.1]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=1004628 ABI122_RS06165 WP_001986215.1 1184955..1185131(+) (comZ) [Bacillus thuringiensis strain 9.1]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment