Detailed information NTG1004546

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FGK83_RS01360
• Genome accession: NZ_LR590465
• Coordinates: 267822..268826 (+)
• Length: 334 a.a.
• NCBI ID: WP_110431213.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain NCTC8468
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 262822..273826

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK83_RS01335 (NCTC8468_00263)	rbsD	262980..263399 (+)	420	WP_005639835.1	D-ribose pyranase	-
FGK83_RS01340 (NCTC8468_00264)	rbsA	263413..264894 (+)	1482	WP_138171482.1	ribose ABC transporter ATP-binding protein RbsA	-
FGK83_RS01345 (NCTC8468_00265)	rbsC	264910..265878 (+)	969	WP_162697457.1	ribose ABC transporter permease	-
FGK83_RS01350 (NCTC8468_00266)	rbsB	265898..266776 (+)	879	WP_005639843.1	ribose ABC transporter substrate-binding protein RbsB	-
FGK83_RS01355 (NCTC8468_00267)	rbsK	266874..267794 (+)	921	WP_138171483.1	ribokinase	-
FGK83_RS01360 (NCTC8468_00268)	cytR	267822..268826 (+)	1005	WP_110431213.1	substrate-binding domain-containing protein	Regulator
FGK83_RS01365 (NCTC8468_00269)	-	268936..269487 (+)	552	WP_005632696.1	TIGR00645 family protein	-
FGK83_RS01370 (NCTC8468_00270)	rraA	269619..270107 (-)	489	WP_005688658.1	ribonuclease E activity regulator RraA	-
FGK83_RS01375 (NCTC8468_00271)	menA	270159..271070 (-)	912	WP_114893709.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
FGK83_RS01380 (NCTC8468_00272)	tsaA	271132..271851 (+)	720	WP_138171484.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
FGK83_RS01385 (NCTC8468_00273)	tehA	271904..272848 (-)	945	WP_171007147.1	dicarboxylate transporter/tellurite-resistance protein TehA	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36758.43 Da
• Isoelectric Point: 7.6607

>NTDB_id=1004546 FGK83_RS01360 WP_110431213.1 267822..268826(+) (cytR) [Haemophilus influenzae strain NCTC8468]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQQHQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVEALLQRIKNPNENYRTLVLEP
TCILRGSISTPSNI

Nucleotide

• Length: 1005 bp

>NTDB_id=1004546 FGK83_RS01360 WP_110431213.1 267822..268826(+) (cytR) [Haemophilus influenzae strain NCTC8468]
ATGGCGACAATGAAAGATATTGCACGACTGGCACAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGGTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGTC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCATTCTTTGCAGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGCAGCATCAATATAATCTTATTATTGCCACCACTGGTGGCGATGCCAAACGCCTACAACAAAA
TCTACAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTACCACTCGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTCCTTGGTATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTTGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTTGCTGTAGAAGCACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTAGTGTTAGAGCCG
ACCTGTATTTTGAGAGGATCAATTTCTACCCCTTCAAACATATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	37.048	99.401	0.368
cytR	Vibrio cholerae C6706	36.228	100	0.362