Detailed information NTG1004492

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: E0F34_RS08990
• Genome accession: NZ_LR536843
• Coordinates: 1654792..1655862 (+)
• Length: 356 a.a.
• NCBI ID: WP_061650003.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1649792..1660862

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0F34_RS12345	-	1650674..1650805 (+)	132	WP_088800136.1	LPXTG cell wall anchor domain-containing protein	-
E0F34_RS08975 (SAMEA104035599_01705)	ylqF	1651025..1651876 (+)	852	WP_000201317.1	ribosome biogenesis GTPase YlqF	-
E0F34_RS08980 (SAMEA104035599_01706)	-	1651863..1652642 (+)	780	WP_000201138.1	ribonuclease HII	-
E0F34_RS08985 (SAMEA104035599_01707)	-	1652658..1654208 (+)	1551	WP_000392537.1	ClC family H(+)/Cl(-) exchange transporter	-
E0F34_RS08990 (SAMEA104035599_01708)	xerS	1654792..1655862 (+)	1071	WP_061650003.1	tyrosine recombinase XerS	Machinery gene
E0F34_RS08995 (SAMEA104035599_01709)	-	1655935..1656924 (-)	990	WP_000873987.1	lipoate--protein ligase	-
E0F34_RS09000 (SAMEA104035599_01710)	lpdA	1656988..1658691 (-)	1704	WP_001162928.1	dihydrolipoyl dehydrogenase	-
E0F34_RS09005 (SAMEA104035599_01711)	-	1658737..1659780 (-)	1044	WP_000227311.1	dihydrolipoamide acetyltransferase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41113.22 Da
• Isoelectric Point: 9.7561

>NTDB_id=1004492 E0F34_RS08990 WP_061650003.1 1654792..1655862(+) (xerS) [Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8]
MKREILLERIDKLKQLMPWYVLEYYQSKLAVPYSFTTLYEYLKEYDRFFSWVLESGISNADKISDIPLSVLENMSKKDME
SFILYLRERPLLNANATKQGVSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETEGFLTYIDQEHPQQLSNRALSSFNKNKERDLAIIALLLASGVRLSEAVNLDLRDLNLKMMVIDVTRKGGKRDS
VNVAAFAKPYLENYLAIRNQRYKTKKTDTALFLTLYRGVPNRIDASSVEKMVAKYSEDFKVRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVSDEQKNALDSL

Nucleotide

• Length: 1071 bp

>NTDB_id=1004492 E0F34_RS08990 WP_061650003.1 1654792..1655862(+) (xerS) [Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8]
ATGAAACGTGAGATTTTACTGGAACGAATCGACAAACTAAAACAACTCATGCCCTGGTATGTTCTGGAATACTACCAATC
TAAGCTGGCTGTGCCCTACAGTTTTACAACCCTGTACGAATACCTTAAGGAATATGACCGATTTTTCAGCTGGGTTTTGG
AGTCTGGTATTTCAAACGCTGATAAAATATCCGATATTCCTTTATCAGTTTTGGAAAATATGTCTAAGAAAGACATGGAA
TCCTTTATCCTTTATCTACGTGAACGTCCCTTGCTGAATGCTAATGCAACAAAACAAGGTGTTTCACAGACAACTATCAA
TCGAACCTTATCAGCACTTTCTAGTCTTTACAAGTATCTAACCGAGGAGGTTGAAAACGATCAGGGGGAACCTTATTTCT
ATCGTAATGTAATGAAAAAAGTTTCAACCAAGAAAAAGAAAGAAACCCTTGCTGCCAGAGCTGAAAATATCAAGCAAAAA
CTCTTTCTAGGTGATGAAACAGAAGGTTTTCTAACTTATATCGATCAAGAGCACCCACAACAGCTTTCAAATCGAGCTCT
CTCATCATTCAACAAAAATAAAGAACGAGATTTAGCCATTATTGCCCTTCTCTTGGCATCTGGTGTTCGCTTATCTGAAG
CTGTTAATCTAGATCTAAGAGATCTCAATCTAAAAATGATGGTTATTGATGTTACTCGAAAAGGTGGCAAACGTGACTCA
GTCAATGTCGCTGCTTTTGCTAAACCTTATTTAGAGAATTATCTGGCCATTCGGAATCAACGCTATAAAACGAAAAAAAC
AGATACAGCCCTTTTTTTAACTCTCTACAGAGGTGTTCCTAATCGTATCGATGCTTCTAGCGTTGAGAAAATGGTTGCTA
AATACTCAGAGGATTTTAAAGTACGTGTAACACCCCATAAACTGCGCCATACACTAGCAACTAGGCTCTATGATGCTACT
AAATCACAAGTTTTAGTCAGTCACCAACTAGGACATGCTAGCACACAAGTCACTGACCTCTATACCCATATTGTTAGTGA
TGAACAAAAGAATGCTCTGGATAGTTTATGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (188-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_1) (71-123)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	99.157	100	0.992