Detailed information NTG1004240

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: E4V11_RS23685
• Genome accession: NZ_LR217818
• Coordinates: 4861927..4862952 (+)
• Length: 341 a.a.
• NCBI ID: WP_066009373.1
• Uniprot ID: -
• Organism: Escherichia coli strain NCTC86
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4856927..4867952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E4V11_RS23665 (SAMEA3446340_04733)	metJ	4857988..4858305 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
E4V11_RS23670 (SAMEA3446340_04734)	yiiX	4858489..4859097 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
E4V11_RS23675 (SAMEA3446340_04735)	rpmE	4859158..4859370 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
E4V11_RS23680 (SAMEA3446340_04736)	priA	4859573..4861771 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
E4V11_RS23685 (SAMEA3446340_04737)	cytR	4861927..4862952 (+)	1026	WP_066009373.1	DNA-binding transcriptional regulator CytR	Regulator
E4V11_RS23690 (SAMEA3446340_04738)	ftsN	4863044..4864003 (+)	960	WP_000068828.1	cell division protein FtsN	-
E4V11_RS23695 (SAMEA3446340_04739)	hslV	4864096..4864626 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
E4V11_RS23700 (SAMEA3446340_04740)	hslU	4864636..4865967 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
E4V11_RS23705 (SAMEA3446340_04741)	menA	4866034..4866960 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
E4V11_RS23710 (SAMEA3446340_04742)	rraA	4867053..4867538 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
E4V11_RS23715 (SAMEA3446340_04743)	zapB	4867623..4867868 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37849.81 Da
• Isoelectric Point: 6.3842

>NTDB_id=1004240 E4V11_RS23685 WP_066009373.1 4861927..4862952(+) (cytR) [Escherichia coli strain NCTC86]
MKAKKQETAATMKDVTLKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1004240 E4V11_RS23685 WP_066009373.1 4861927..4862952(+) (cytR) [Escherichia coli strain NCTC86]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTACCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625