Detailed information NTG1004067

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABH595_RS06275
• Genome accession: NZ_CP157084
• Coordinates: 1215286..1216239 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis subsp. subtilis isolate FELIX_MS9
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1210286..1221239

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH595_RS06250 (ABH595_06250)	argF	1212118..1213077 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
ABH595_RS06255 (ABH595_06255)	yjzC	1213163..1213342 (+)	180	WP_003245356.1	YjzC family protein	-
ABH595_RS06260 (ABH595_06260)	yjzD	1213388..1213573 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
ABH595_RS06265 (ABH595_06265)	-	1213822..1214556 (+)	735	WP_003245223.1	hypothetical protein	-
ABH595_RS06270 (ABH595_06270)	-	1214638..1215195 (+)	558	WP_003232974.1	hypothetical protein	-
ABH595_RS06275 (ABH595_06275)	med	1215286..1216239 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
ABH595_RS06280 (ABH595_06280)	comZ	1216254..1216445 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ABH595_RS06285 (ABH595_06285)	yjzB	1216475..1216714 (-)	240	WP_003232972.1	spore coat protein YjzB	-
ABH595_RS06290 (ABH595_06290)	fabH	1216879..1217817 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
ABH595_RS06295 (ABH595_06295)	fabF	1217840..1219081 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
ABH595_RS06300 (ABH595_06300)	yjaZ	1219157..1219942 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
ABH595_RS06305 (ABH595_06305)	appD	1220134..1221120 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=1004067 ABH595_RS06275 WP_003245494.1 1215286..1216239(+) (med) [Bacillus subtilis subsp. subtilis isolate FELIX_MS9]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1004067 ABH595_RS06275 WP_003245494.1 1215286..1216239(+) (med) [Bacillus subtilis subsp. subtilis isolate FELIX_MS9]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1