Detailed information
Bioinformatically predicted
Overview
| Name | cipB | Type | Regulator |
| Locus tag | E0F40_RS02545 | Genome accession | NZ_LR216065 |
| Coordinates | 460263..460412 (+) | Length | 49 a.a. |
| NCBI ID | WP_001813641.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain GPSC18 substr. ST13 isolate 55896440-41bd-11e5-998e-3c4a9275d6c6 | ||
| Function | indirect induction of ComX; activation of comRS system (predicted from homology) Competence regulation |
||
Genomic Context
Location: 455263..465412
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0F40_RS02505 (SAMEA3714487_00457) | blpU | 457127..457357 (+) | 231 | WP_001093268.1 | bacteriocin-like peptide BlpU | - |
| E0F40_RS02510 | - | 457360..457479 (+) | 120 | WP_000346298.1 | PncF family bacteriocin immunity protein | - |
| E0F40_RS11705 (SAMEA3714487_00458) | - | 457776..457940 (+) | 165 | WP_000727118.1 | hypothetical protein | - |
| E0F40_RS02520 (SAMEA3714487_00459) | - | 457937..458341 (+) | 405 | WP_000846944.1 | hypothetical protein | - |
| E0F40_RS02525 | - | 458539..459344 (+) | 806 | Protein_471 | IS5 family transposase | - |
| E0F40_RS02530 (SAMEA3714487_00462) | blpM | 459546..459800 (+) | 255 | WP_000379879.1 | two-peptide bacteriocin subunit BlpM | - |
| E0F40_RS02535 (SAMEA3714487_00463) | blpN | 459816..460019 (+) | 204 | WP_001099492.1 | two-peptide bacteriocin subunit BlpN | - |
| E0F40_RS02545 (SAMEA3714487_00464) | cipB | 460263..460412 (+) | 150 | WP_001813641.1 | bacteriocin-like peptide BlpO | Regulator |
| E0F40_RS02550 | - | 460516..460635 (+) | 120 | WP_000346296.1 | PncF family bacteriocin immunity protein | - |
| E0F40_RS02560 (SAMEA3714487_00465) | - | 461421..461804 (+) | 384 | WP_000877378.1 | hypothetical protein | - |
| E0F40_RS02565 (SAMEA3714487_00466) | - | 461856..462545 (+) | 690 | WP_000760541.1 | CPBP family intramembrane glutamic endopeptidase | - |
| E0F40_RS02570 (SAMEA3714487_00467) | blpZ | 462587..462820 (+) | 234 | WP_000276498.1 | immunity protein BlpZ | - |
| E0F40_RS02580 (SAMEA3714487_00468) | - | 462971..463582 (+) | 612 | WP_000394045.1 | CPBP family intramembrane glutamic endopeptidase | - |
| E0F40_RS02585 (SAMEA3714487_00469) | ccrZ | 463743..464537 (+) | 795 | WP_000363002.1 | cell cycle regulator CcrZ | - |
| E0F40_RS02590 (SAMEA3714487_00470) | trmB | 464534..465169 (+) | 636 | WP_001266078.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
Sequence
Protein
Download Length: 49 a.a. Molecular weight: 5164.93 Da Isoelectric Point: 3.9133
>NTDB_id=1004067 E0F40_RS02545 WP_001813641.1 460263..460412(+) (cipB) [Streptococcus pneumoniae strain GPSC18 substr. ST13 isolate 55896440-41bd-11e5-998e-3c4a9275d6c6]
MDTKMMSQFAVMDNEMLACVEGGDIDWGRKISCTAGVAYGAIDGCATTV
MDTKMMSQFAVMDNEMLACVEGGDIDWGRKISCTAGVAYGAIDGCATTV
Nucleotide
Download Length: 150 bp
>NTDB_id=1004067 E0F40_RS02545 WP_001813641.1 460263..460412(+) (cipB) [Streptococcus pneumoniae strain GPSC18 substr. ST13 isolate 55896440-41bd-11e5-998e-3c4a9275d6c6]
ATGGATACAAAAATGATGTCACAATTTGCAGTTATGGATAATGAAATGCTTGCTTGCGTTGAAGGTGGAGATATTGATTG
GGGAAGAAAAATTAGTTGTACAGCAGGGGTTGCATATGGCGCAATTGATGGGTGTGCAACAACGGTTTGA
ATGGATACAAAAATGATGTCACAATTTGCAGTTATGGATAATGAAATGCTTGCTTGCGTTGAAGGTGGAGATATTGATTG
GGGAAGAAAAATTAGTTGTACAGCAGGGGTTGCATATGGCGCAATTGATGGGTGTGCAACAACGGTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cipB | Streptococcus mutans UA159 |
48.98 |
100 |
0.49 |