Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AAEY33_RS26100 Genome accession   NZ_CP157082
Coordinates   5302566..5303516 (-) Length   316 a.a.
NCBI ID   WP_144527586.1    Uniprot ID   -
Organism   Peribacillus simplex strain IMGN11     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5297566..5308516
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAEY33_RS26085 (AAEY33_26080) - 5299719..5300663 (-) 945 WP_185150832.1 siderophore ABC transporter substrate-binding protein -
  AAEY33_RS26090 (AAEY33_26085) - 5300874..5301632 (-) 759 WP_063233995.1 ABC transporter ATP-binding protein -
  AAEY33_RS26095 (AAEY33_26090) - 5301626..5302573 (-) 948 WP_144527587.1 iron chelate uptake ABC transporter family permease subunit -
  AAEY33_RS26100 (AAEY33_26095) ceuB 5302566..5303516 (-) 951 WP_144527586.1 ABC transporter permease Machinery gene
  AAEY33_RS26105 (AAEY33_26100) - 5303781..5304122 (+) 342 WP_141992847.1 DUF1450 domain-containing protein -
  AAEY33_RS26110 (AAEY33_26105) - 5304342..5305991 (+) 1650 WP_347940790.1 M14 family metallocarboxypeptidase -
  AAEY33_RS26115 (AAEY33_26110) shc 5306159..5308054 (+) 1896 WP_347940792.1 squalene--hopene cyclase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34893.22 Da        Isoelectric Point: 9.6490

>NTDB_id=1004027 AAEY33_RS26100 WP_144527586.1 5302566..5303516(-) (ceuB) [Peribacillus simplex strain IMGN11]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLNLSDDKVQIMLQSRFPRMVTIIIAGVVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYVSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKLIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1004027 AAEY33_RS26100 WP_144527586.1 5302566..5303516(-) (ceuB) [Peribacillus simplex strain IMGN11]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTTTATCATTTACGTCATTATTCATTGGTGTAAAAGATATTACCCC
TCTTGATTTATTGAATCTGAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTTCCTAGAATGGTGACGATAATCA
TTGCCGGCGTGGTGATGAGTATAAGCGGCCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTATCCCCGACGACTGCC
GGAACCATGGATTCTGCAAGGCTTGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCTGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATTT
TCATTCCATTGGTCGGTTTGATGTTTGGTAATATCGTCGGATCCATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGGGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATGTAAGTATCCC
TCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGTGAGGAGTTTGCCATCAATCTAGGAC
TCAATTATAAGCTTATAGTCAATTTTGGGTTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCAAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGTTAGGGGCAGTATTCCTATTGATCTGCGATATTCTGGGCAGGATCCTCATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTGATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

100

0.503

Multiple sequence alignment