Detailed information NTG1003969

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: E0F31_RS04965
• Genome accession: NZ_LR216064
• Coordinates: 922634..923704 (-)
• Length: 356 a.a.
• NCBI ID: WP_054363192.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 917634..928704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0F31_RS04950 (SAMEA3714520_00925)	-	918724..919767 (+)	1044	WP_000752697.1	dihydrolipoamide acetyltransferase	-
E0F31_RS04955 (SAMEA3714520_00926)	lpdA	919813..921516 (+)	1704	WP_054363194.1	dihydrolipoyl dehydrogenase	-
E0F31_RS04960 (SAMEA3714520_00927)	-	921580..922569 (+)	990	WP_000873984.1	lipoate--protein ligase	-
E0F31_RS04965 (SAMEA3714520_00928)	xerS	922634..923704 (-)	1071	WP_054363192.1	tyrosine recombinase XerS	Machinery gene
E0F31_RS04970 (SAMEA3714520_00929)	-	924290..925840 (-)	1551	WP_000392544.1	ClC family H(+)/Cl(-) exchange transporter	-
E0F31_RS04975 (SAMEA3714520_00930)	-	925856..926635 (-)	780	WP_000201138.1	ribonuclease HII	-
E0F31_RS04980 (SAMEA3714520_00931)	ylqF	926622..927473 (-)	852	WP_000201317.1	ribosome biogenesis GTPase YlqF	-
E0F31_RS12300	-	927693..927869 (-)	177	WP_078063946.1	LPXTG cell wall anchor domain-containing protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41171.21 Da
• Isoelectric Point: 9.6220

>NTDB_id=1003969 E0F31_RS04965 WP_054363192.1 922634..923704(-) (xerS) [Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6]
MKREILLERIDKLKQLMPWYVLEYYQSKLAVPYSFTTLYEYLKEYDRFFSWVLESGISNADKISDIPLSVLENMSKKDME
SFILYLRERPLLNANTTKQGVSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETEGFLTYIDQEHPQQLSNRALSSFNKNKERDLAIIALLLASGVRLSEAVNLDIRDLNLKMMVIDVTRKGGKRDS
VNVAAFAKPYLENYLAIRNQRYKTEKTDTALFLTLYRGVPNRIDASSVEKMVAKYSEDFKVRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDSL

Nucleotide

• Length: 1071 bp

>NTDB_id=1003969 E0F31_RS04965 WP_054363192.1 922634..923704(-) (xerS) [Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6]
ATGAAACGTGAGATTTTACTGGAACGAATCGACAAACTAAAACAACTCATGCCCTGGTATGTTCTGGAATACTACCAATC
TAAGCTGGCTGTGCCCTACAGTTTTACAACCCTGTACGAATACCTTAAGGAATATGACCGATTTTTCAGCTGGGTTTTGG
AGTCTGGTATTTCAAACGCTGATAAAATATCCGATATTCCTTTATCAGTTTTGGAAAATATGTCTAAGAAAGACATGGAA
TCCTTTATCCTTTATCTACGTGAACGTCCCTTGCTGAATGCTAATACAACAAAACAAGGTGTTTCACAGACAACTATCAA
TCGAACCTTATCAGCACTTTCTAGTCTTTACAAATATCTAACCGAGGAGGTTGAAAACGATCAGGGGGAACCTTATTTCT
ATCGTAATGTAATGAAAAAAGTTTCAACCAAGAAAAAGAAAGAAACCCTTGCTGCCAGAGCTGAAAATATCAAGCAAAAA
CTCTTTCTAGGTGATGAAACAGAAGGTTTTCTAACTTATATCGATCAAGAGCACCCACAACAGCTTTCAAATCGAGCTCT
CTCATCATTCAACAAAAATAAAGAACGAGATTTAGCCATTATTGCCCTTCTCTTGGCATCTGGTGTTCGCTTATCTGAAG
CTGTTAATCTAGATATAAGAGATCTCAATCTAAAAATGATGGTTATTGATGTTACTCGAAAAGGTGGCAAACGTGACTCA
GTCAATGTCGCTGCTTTTGCTAAACCTTATTTAGAGAATTATCTGGCCATTCGGAATCAACGCTATAAAACGGAAAAAAC
AGATACAGCCCTTTTTTTAACTCTCTACAGAGGTGTTCCTAATCGTATCGATGCTTCTAGCGTTGAGAAAATGGTTGCTA
AATACTCAGAGGATTTTAAAGTACGTGTAACACCCCATAAACTGCGCCATACACTAGCAACTAGGCTCTATGATGCGACT
AAATCACAAGTTTTAGTCAGTCACCAACTAGGACATGCCAGCACACAAGTCACTGACCTCTATACCCATATTGTTAATGA
TGAACAAAAGAATGCTCTGGATAGTTTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (188-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_1) (71-123)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	99.719	100	0.997