Detailed information NTG1003941

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ABHF54_RS08925
• Genome accession: NZ_CP157069
• Coordinates: 1884760..1885797 (-)
• Length: 345 a.a.
• NCBI ID: WP_347887919.1
• Uniprot ID: -
• Organism: Nitrosomonas europaea strain CCTCC M 2024693 isolate miaainf
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1879760..1890797

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABHF54_RS08890 (ABHF54_08885)	-	1879792..1880082 (-)	291	WP_347889069.1	PepSY domain-containing protein	-
ABHF54_RS08895 (ABHF54_08890)	-	1880167..1880511 (-)	345	WP_041356764.1	hypothetical protein	-
ABHF54_RS08900 (ABHF54_08895)	-	1880806..1880958 (-)	153	WP_276679803.1	hypothetical protein	-
ABHF54_RS08905 (ABHF54_08900)	-	1881043..1881867 (+)	825	WP_281871803.1	methane monooxygenase/ammonia monooxygenase subunit C	-
ABHF54_RS08910 (ABHF54_08905)	ispD	1882408..1883115 (-)	708	WP_347887917.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
ABHF54_RS08915 (ABHF54_08910)	ftsX	1883152..1884072 (-)	921	WP_347887918.1	permease-like cell division protein FtsX	-
ABHF54_RS08920 (ABHF54_08915)	-	1884069..1884722 (-)	654	WP_347889070.1	ATP-binding cassette domain-containing protein	-
ABHF54_RS08925 (ABHF54_08920)	pilA	1884760..1885797 (-)	1038	WP_347887919.1	signal recognition particle-docking protein FtsY	Machinery gene
ABHF54_RS08930 (ABHF54_08925)	-	1885864..1887252 (+)	1389	WP_347887920.1	pitrilysin family protein	-
ABHF54_RS08935 (ABHF54_08930)	alr	1887375..1888463 (+)	1089	WP_347887921.1	alanine racemase	-
ABHF54_RS08940 (ABHF54_08935)	-	1888482..1889276 (-)	795	WP_276679841.1	peptidyl-prolyl cis-trans isomerase	-
ABHF54_RS08945 (ABHF54_08940)	-	1889432..1889734 (-)	303	WP_276679840.1	YciI family protein	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37709.25 Da
• Isoelectric Point: 6.9999

>NTDB_id=1003941 ABHF54_RS08925 WP_347887919.1 1884760..1885797(-) (pilA) [Nitrosomonas europaea strain CCTCC M 2024693 isolate miaainf]
MIFTFLKQKQPTRMFSIFKSKKNPDEKNPAQVETGPVSFTDKIRQGLTRTRQQLGKQLSGLFGGRKIDEDLYEELETALL
TADTGIEATNRLLESLRTRVRRDALDDSEQLKTVLQDVLTELLQPLERPLVTTGHTPFVIMIAGVNGVGKTTTIGKLAHY
FQSQGHSVLLAAGDTFRAAAQEQLKVWGERNQITVISQESDPGKKSDPAAVIFDAINAAIARKIDIVLADTAGRLTTQLH
LMEEIRKIKRVIAKAIPDAPHEVLLVLDANTGQNAISQLKAFNDALGVTGLVMTKLDGTARGGVIAAIAAQFTDTPPALR
FIGVGEGLDDLRPFNAREFAEALFD

Nucleotide

• Length: 1038 bp

>NTDB_id=1003941 ABHF54_RS08925 WP_347887919.1 1884760..1885797(-) (pilA) [Nitrosomonas europaea strain CCTCC M 2024693 isolate miaainf]
ATGATATTTACCTTCCTGAAACAGAAACAGCCTACCAGAATGTTTAGTATTTTTAAATCCAAAAAGAATCCTGATGAAAA
AAATCCGGCTCAGGTTGAAACCGGGCCGGTCAGTTTTACCGATAAGATCAGGCAAGGGCTGACACGTACACGACAGCAGC
TTGGAAAGCAGTTATCCGGATTGTTCGGTGGCAGGAAAATCGATGAGGATTTGTACGAAGAGCTCGAAACTGCTTTATTG
ACGGCAGATACCGGAATCGAGGCGACAAACCGGTTGCTGGAGTCATTGCGCACTCGTGTCAGGCGTGATGCACTGGATGA
TTCGGAACAGCTCAAAACAGTCTTGCAGGATGTGCTGACCGAACTGCTGCAGCCGCTGGAACGGCCACTGGTCACAACCG
GGCATACACCTTTCGTGATCATGATCGCGGGTGTGAATGGTGTTGGTAAAACTACGACCATCGGCAAGCTGGCCCATTAT
TTCCAGTCACAGGGACACTCCGTATTGCTGGCGGCGGGCGACACTTTTCGCGCAGCAGCACAGGAACAGCTCAAGGTATG
GGGTGAACGTAACCAGATCACGGTCATTTCACAGGAAAGTGACCCGGGTAAAAAAAGTGATCCGGCAGCCGTGATTTTCG
ATGCAATCAATGCTGCCATCGCCAGAAAAATCGATATCGTCCTGGCTGATACCGCCGGTCGCCTGACGACCCAGCTTCAT
CTGATGGAAGAAATCAGGAAAATCAAGCGAGTCATCGCTAAAGCTATCCCGGATGCGCCACACGAGGTATTACTGGTGTT
GGATGCAAATACCGGTCAGAACGCCATCAGCCAGTTAAAGGCTTTCAATGATGCGCTGGGCGTTACCGGGCTGGTCATGA
CCAAACTGGATGGAACTGCCAGGGGCGGAGTGATTGCTGCCATCGCTGCACAATTTACCGATACACCACCAGCACTGCGC
TTCATCGGGGTGGGGGAGGGGCTGGATGATTTAAGGCCCTTCAATGCCCGTGAATTTGCTGAAGCACTGTTCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (137-344)

• SRP54-type protein, helical bundle domain (SRP54_N) (54-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	60.252	91.884	0.554