Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   ABGT21_RS16145 Genome accession   NZ_CP156990
Coordinates   3006253..3008214 (-) Length   653 a.a.
NCBI ID   WP_276569535.1    Uniprot ID   -
Organism   Bacillus subtilis strain AR02-06     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3001253..3013214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABGT21_RS16105 (ABGT21_16105) mrpB 3001720..3002151 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  ABGT21_RS16110 (ABGT21_16110) mrpC 3002151..3002492 (+) 342 WP_014480700.1 Na(+)/H(+) antiporter subunit C -
  ABGT21_RS16115 (ABGT21_16115) mrpD 3002485..3003966 (+) 1482 WP_033881486.1 Na+/H+ antiporter subunit D -
  ABGT21_RS16120 (ABGT21_16120) mrpE 3003972..3004448 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ABGT21_RS16125 (ABGT21_16125) mrpF 3004448..3004732 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ABGT21_RS16130 (ABGT21_16130) mnhG 3004716..3005090 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  ABGT21_RS16135 (ABGT21_16135) yuxO 3005129..3005509 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  ABGT21_RS16140 (ABGT21_16140) comA 3005528..3006172 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ABGT21_RS16145 (ABGT21_16145) comP 3006253..3008214 (-) 1962 WP_276569535.1 histidine kinase Regulator
  ABGT21_RS16150 (ABGT21_16150) - 3008397..3009521 (+) 1125 WP_031601042.1 IS4-like element IS4Bsu1 family transposase -
  ABGT21_RS16155 (ABGT21_16155) - 3009651..3009980 (-) 330 WP_322808282.1 hypothetical protein -
  ABGT21_RS16160 (ABGT21_16160) comX 3009996..3010217 (-) 222 WP_014480704.1 competence pheromone ComX -
  ABGT21_RS16165 (ABGT21_16165) - 3010219..3011082 (-) 864 WP_014480705.1 polyprenyl synthetase family protein -
  ABGT21_RS16170 (ABGT21_16170) degQ 3011267..3011407 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ABGT21_RS16175 (ABGT21_16175) - 3011629..3011754 (+) 126 WP_003228793.1 hypothetical protein -
  ABGT21_RS16180 (ABGT21_16180) - 3011868..3012236 (+) 369 WP_014477834.1 hypothetical protein -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 76095.33 Da        Isoelectric Point: 8.9166

>NTDB_id=1003653 ABGT21_RS16145 WP_276569535.1 3006253..3008214(-) (comP) [Bacillus subtilis strain AR02-06]
MYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSVAYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKY
FIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSNLNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLA
YTNIFSFSPFIVFFAVPYVFFEKYVSPFSLAAFTLVIPFSLVYQFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNY
IQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEKFNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNI
DNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKIKEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEI
AWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKLMYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGD
FKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLD
SQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETS
EGKGFKADIEIEL

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=1003653 ABGT21_RS16145 WP_276569535.1 3006253..3008214(-) (comP) [Bacillus subtilis strain AR02-06]
ATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATATTTTTTATTTATAGAATAAATAAAGTAAGAAA
ATCAACTTCTGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTAGCGTATGTAAGTGCATGTGGAGCAAGAAGAG
GTGAAGAGATAAGCACTTATCTGCTTGTTCTTACTTTAGTCAGTTGTCCGGTGTTATATATTCATTTTATATATAAATAC
TTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTATGTATATGCTCCCGCTAATAAATCTTTTATT
AGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAATCTGAATTTGATTTCATTTTTTGTCCTAGTTC
TTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAAAGAGCAAAAGTCAATTTTGAAAGTCCTTGCT
TATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTCCATATGTGTTTTTCGAGAAGTATGTCTCACC
TTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATATCAATTTATGACTAATAGACTTTATAATATCG
ACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACCTACTATTATCGTAGTGACCATCTTTAATTAC
ATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAATATATGTTCTTATGTTTGCCGTTTTTTACTT
TAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAATTTAATTATCAAGATGGGATTTTTAAATTTA
CTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTTTAAAAATACAATCCTAGAAGTATTAAACATA
GATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTAGTAAGAACAACTTTAAAGATCTGACTTATAA
AAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATTAAAGAGTTTAAACAAGGTTTTATTATTAAAA
TAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTATAATACTTTTAAGTTAACAAGGGATGAAATT
GCATGGCTTCAAACATTAGCATTTTATACAAATGTCTCATTGGAAAACGTTATGAAAATCGAAGAATTGATGGTGCATCT
TGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATCGAGGAAAAACAACGCTCGG
ATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGTGAGCTGTTTTTGGGTGAT
TTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATGAGCAGATGTCTGATGTGAT
TTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGGCTGGTCAAGGCGCTGTCGAAGC
TGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGGAGATTTACGGCTTCCCTTGATCTGGAT
TCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGGCGACGGATGTGCTGAT
TATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGATTTGATCAGGAAAAGAATACTG
AGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCTTCGGATTGAAACAAGT
GAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA

Domains

Predicted by InterProScan.

Histidine kinase (HisKA_3)

(452-522)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(563-649)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

61.586

98.469

0.606

Multiple sequence alignment