Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   ABGT21_RS02150 Genome accession   NZ_CP156990
Coordinates   426102..426224 (+) Length   40 a.a.
NCBI ID   WP_003224994.1    Uniprot ID   G4NQY6
Organism   Bacillus subtilis strain AR02-06     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 421102..431224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABGT21_RS02135 (ABGT21_02135) yclJ 422716..423399 (+) 684 WP_003246532.1 two-component system response regulator YclJ -
  ABGT21_RS02140 (ABGT21_02140) yclK 423386..424807 (+) 1422 WP_072173981.1 two-component system sensor histidine kinase YclK -
  ABGT21_RS02145 (ABGT21_02145) rapC 424970..426118 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  ABGT21_RS02150 (ABGT21_02150) phrC 426102..426224 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  ABGT21_RS02155 (ABGT21_02155) yczM 426323..426412 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  ABGT21_RS02160 (ABGT21_02160) yczN 426494..426607 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  ABGT21_RS02165 (ABGT21_02165) thrD 426760..428124 (-) 1365 WP_014478832.1 aspartate kinase -
  ABGT21_RS02170 (ABGT21_02170) ceuB 428515..429465 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  ABGT21_RS02175 (ABGT21_02175) yclO 429458..430405 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  ABGT21_RS02180 (ABGT21_02180) yclP 430399..431157 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -

Sequence

Protein


Download         Length: 40 a.a.        Molecular weight: 4197.98 Da        Isoelectric Point: 8.0285

>NTDB_id=1003601 ABGT21_RS02150 WP_003224994.1 426102..426224(+) (phrC) [Bacillus subtilis strain AR02-06]
MKLKSKLFVICLAAAAIFTAAGVSANAEALDFHVTERGMT

Nucleotide


Download         Length: 123 bp        

>NTDB_id=1003601 ABGT21_RS02150 WP_003224994.1 426102..426224(+) (phrC) [Bacillus subtilis strain AR02-06]
ATGAAATTGAAATCTAAGTTGTTTGTTATTTGTTTGGCCGCAGCCGCGATTTTTACAGCGGCTGGCGTTTCTGCTAATGC
GGAAGCACTCGACTTTCATGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-40)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NQY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment