Detailed information
Bioinformatically predicted
Overview
| Name | pilM | Type | Machinery gene |
| Locus tag | M744_RS03835 | Genome accession | NZ_CP006471 |
| Coordinates | 732520..733599 (+) | Length | 359 a.a. |
| NCBI ID | WP_011243962.1 | Uniprot ID | Q31KD6 |
| Organism | Synechococcus elongatus UTEX 2973 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 727520..738599
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M744_RS03810 (M744_03945) | glyQ | 728116..728994 (-) | 879 | WP_011378472.1 | glycine--tRNA ligase subunit alpha | - |
| M744_RS03815 (M744_03950) | - | 729109..730059 (-) | 951 | WP_011243958.1 | DUF4335 domain-containing protein | - |
| M744_RS03820 (M744_03955) | - | 730066..730689 (-) | 624 | WP_039755549.1 | DUF3038 domain-containing protein | - |
| M744_RS03825 (M744_03960) | - | 730860..731376 (+) | 517 | Protein_752 | adenine phosphoribosyltransferase | - |
| M744_RS03830 (M744_03965) | - | 731383..732378 (+) | 996 | WP_039755550.1 | ABC transporter permease | - |
| M744_RS03835 (M744_03970) | pilM | 732520..733599 (+) | 1080 | WP_011243962.1 | type IV pilus assembly protein PilM | Machinery gene |
| M744_RS03840 (M744_03975) | - | 733602..733940 (+) | 339 | WP_011243963.1 | hypothetical protein | - |
| M744_RS03845 (M744_03980) | pilN | 733959..734318 (+) | 360 | WP_234910001.1 | PilN domain-containing protein | Machinery gene |
| M744_RS03850 (M744_03985) | - | 734315..735109 (+) | 795 | WP_011378469.1 | hypothetical protein | - |
| M744_RS03855 (M744_03990) | - | 735187..737502 (+) | 2316 | WP_011378468.1 | secretin N-terminal domain-containing protein | - |
| M744_RS03860 (M744_03995) | - | 737674..738309 (-) | 636 | WP_011378467.1 | peroxiredoxin | - |
Sequence
Protein
Download Length: 359 a.a. Molecular weight: 39624.35 Da Isoelectric Point: 4.3756
>NTDB_id=100344 M744_RS03835 WP_011243962.1 732520..733599(+) (pilM) [Synechococcus elongatus UTEX 2973]
MVGIFSKFLGGDQSRLGVEITPERINLAHIGRKGNRLQLQDFVSVELPDGLFQDGRVLDSFSLSDLLRTAINDNRIRTKR
VSTAVPGREVITRLLPMPAELDDAELRETLINQEAALFLPFPREEADIDYLKLDYFLDADEVEKLHVLLVATRRQVTDVY
LDLFAQAGLTPDIVEVGSFALIRTIREALRQYGLQEAVILLNVEYDLTEIVIIVGGVPRFSRTIAMGTQQWQRAAAQAGI
DNTGRGIDFLQGRSFTLLEPPADLLSQALARSVTELCDEVRRSADFYLSQETDIEVAKLYVAGPGSALPTLPEFLGQRLG
LPVELVDPVEGLGLEVAENLYLPNRADVGVVLGLATRGV
MVGIFSKFLGGDQSRLGVEITPERINLAHIGRKGNRLQLQDFVSVELPDGLFQDGRVLDSFSLSDLLRTAINDNRIRTKR
VSTAVPGREVITRLLPMPAELDDAELRETLINQEAALFLPFPREEADIDYLKLDYFLDADEVEKLHVLLVATRRQVTDVY
LDLFAQAGLTPDIVEVGSFALIRTIREALRQYGLQEAVILLNVEYDLTEIVIIVGGVPRFSRTIAMGTQQWQRAAAQAGI
DNTGRGIDFLQGRSFTLLEPPADLLSQALARSVTELCDEVRRSADFYLSQETDIEVAKLYVAGPGSALPTLPEFLGQRLG
LPVELVDPVEGLGLEVAENLYLPNRADVGVVLGLATRGV
Nucleotide
Download Length: 1080 bp
>NTDB_id=100344 M744_RS03835 WP_011243962.1 732520..733599(+) (pilM) [Synechococcus elongatus UTEX 2973]
GTGGTCGGCATTTTTTCTAAGTTTCTTGGTGGCGATCAATCGCGCCTTGGGGTGGAAATTACCCCAGAGCGGATCAATCT
TGCCCACATTGGCCGCAAGGGGAATCGCCTGCAGCTTCAGGATTTTGTTTCCGTGGAGCTACCGGATGGGTTGTTTCAAG
ACGGGCGCGTGCTAGATAGCTTCAGCCTGTCCGATCTGCTCCGCACCGCCATCAACGACAACCGCATCAGAACCAAAAGA
GTCTCCACTGCGGTGCCAGGACGAGAGGTGATCACCCGGCTGCTGCCCATGCCCGCGGAGCTCGATGATGCCGAATTGCG
CGAGACACTGATCAATCAAGAAGCTGCTCTGTTCCTGCCCTTCCCGCGTGAAGAGGCCGACATCGACTATCTGAAACTGG
ACTATTTTCTGGACGCGGATGAGGTCGAAAAGTTGCACGTCCTGCTCGTGGCGACTCGTCGGCAGGTGACCGATGTCTAC
CTTGATCTCTTTGCCCAAGCTGGCCTGACGCCTGACATTGTGGAAGTTGGGAGCTTTGCGCTAATCCGAACGATTCGCGA
AGCGCTGCGCCAGTACGGATTGCAAGAAGCGGTCATTCTCCTCAACGTGGAATATGACCTCACAGAAATCGTGATTATCG
TTGGGGGCGTGCCTCGGTTTAGCCGCACGATCGCCATGGGTACTCAGCAGTGGCAGCGGGCTGCAGCCCAAGCTGGTATC
GACAATACAGGACGGGGTATTGATTTCCTGCAGGGGCGATCGTTCACATTGCTCGAACCCCCGGCTGATCTCCTCTCTCA
AGCTCTGGCACGATCGGTCACCGAGCTCTGTGATGAAGTACGGCGATCGGCTGACTTCTACCTCAGCCAAGAGACCGATA
TTGAAGTAGCCAAGCTCTACGTTGCAGGTCCAGGCTCAGCCTTGCCAACACTACCCGAGTTTCTGGGGCAACGCCTAGGG
CTCCCTGTAGAACTCGTCGATCCTGTCGAGGGGTTGGGGCTCGAGGTGGCGGAGAACCTTTATTTGCCAAATCGCGCTGA
TGTGGGCGTGGTGTTGGGCTTAGCCACGCGAGGAGTATAG
GTGGTCGGCATTTTTTCTAAGTTTCTTGGTGGCGATCAATCGCGCCTTGGGGTGGAAATTACCCCAGAGCGGATCAATCT
TGCCCACATTGGCCGCAAGGGGAATCGCCTGCAGCTTCAGGATTTTGTTTCCGTGGAGCTACCGGATGGGTTGTTTCAAG
ACGGGCGCGTGCTAGATAGCTTCAGCCTGTCCGATCTGCTCCGCACCGCCATCAACGACAACCGCATCAGAACCAAAAGA
GTCTCCACTGCGGTGCCAGGACGAGAGGTGATCACCCGGCTGCTGCCCATGCCCGCGGAGCTCGATGATGCCGAATTGCG
CGAGACACTGATCAATCAAGAAGCTGCTCTGTTCCTGCCCTTCCCGCGTGAAGAGGCCGACATCGACTATCTGAAACTGG
ACTATTTTCTGGACGCGGATGAGGTCGAAAAGTTGCACGTCCTGCTCGTGGCGACTCGTCGGCAGGTGACCGATGTCTAC
CTTGATCTCTTTGCCCAAGCTGGCCTGACGCCTGACATTGTGGAAGTTGGGAGCTTTGCGCTAATCCGAACGATTCGCGA
AGCGCTGCGCCAGTACGGATTGCAAGAAGCGGTCATTCTCCTCAACGTGGAATATGACCTCACAGAAATCGTGATTATCG
TTGGGGGCGTGCCTCGGTTTAGCCGCACGATCGCCATGGGTACTCAGCAGTGGCAGCGGGCTGCAGCCCAAGCTGGTATC
GACAATACAGGACGGGGTATTGATTTCCTGCAGGGGCGATCGTTCACATTGCTCGAACCCCCGGCTGATCTCCTCTCTCA
AGCTCTGGCACGATCGGTCACCGAGCTCTGTGATGAAGTACGGCGATCGGCTGACTTCTACCTCAGCCAAGAGACCGATA
TTGAAGTAGCCAAGCTCTACGTTGCAGGTCCAGGCTCAGCCTTGCCAACACTACCCGAGTTTCTGGGGCAACGCCTAGGG
CTCCCTGTAGAACTCGTCGATCCTGTCGAGGGGTTGGGGCTCGAGGTGGCGGAGAACCTTTATTTGCCAAATCGCGCTGA
TGTGGGCGTGGTGTTGGGCTTAGCCACGCGAGGAGTATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilM | Synechocystis sp. PCC 6803 |
46.322 |
100 |
0.474 |