Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   ABHM42_RS31115 Genome accession   NZ_CP156941
Coordinates   6615119..6615526 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain 2024CK-00455     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 6610119..6620526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABHM42_RS31095 (ABHM42_31090) pilK 6611051..6611926 (-) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -
  ABHM42_RS31100 (ABHM42_31095) pilJ 6611987..6614035 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  ABHM42_RS31105 (ABHM42_31100) - 6614120..6614656 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  ABHM42_RS31110 (ABHM42_31105) pilH 6614707..6615072 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  ABHM42_RS31115 (ABHM42_31110) pilG 6615119..6615526 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  ABHM42_RS31120 (ABHM42_31115) gshB 6615781..6616734 (+) 954 WP_023435373.1 glutathione synthase -
  ABHM42_RS31125 (ABHM42_31120) - 6616881..6617774 (+) 894 WP_003084580.1 TonB family protein -
  ABHM42_RS31130 (ABHM42_31125) - 6617823..6618392 (+) 570 WP_003084577.1 YqgE/AlgH family protein -
  ABHM42_RS31135 (ABHM42_31130) ruvX 6618392..6618826 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  ABHM42_RS31140 (ABHM42_31135) pyrR 6618938..6619450 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ABHM42_RS31145 (ABHM42_31140) - 6619474..6620478 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=1003418 ABHM42_RS31115 WP_003084583.1 6615119..6615526(-) (pilG) [Pseudomonas aeruginosa strain 2024CK-00455]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1003418 ABHM42_RS31115 WP_003084583.1 6615119..6615526(-) (pilG) [Pseudomonas aeruginosa strain 2024CK-00455]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGTTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment