Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ABHL50_RS17750 | Genome accession | NZ_CP156933 |
| Coordinates | 3672028..3672501 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214065.1 | Uniprot ID | N9K1Q3 |
| Organism | Acinetobacter baumannii strain 2024CK-00546 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3667028..3677501
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABHL50_RS17735 (ABHL50_17735) | pilX | 3669657..3670475 (-) | 819 | WP_281717928.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ABHL50_RS17740 (ABHL50_17740) | pilW | 3670472..3671473 (-) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| ABHL50_RS17745 (ABHL50_17745) | pilV | 3671474..3672034 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ABHL50_RS17750 (ABHL50_17750) | fimU | 3672028..3672501 (-) | 474 | WP_001214065.1 | GspH/FimT family pseudopilin | Machinery gene |
| ABHL50_RS17755 (ABHL50_17755) | ispH | 3672671..3673621 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ABHL50_RS17760 (ABHL50_17760) | gmk | 3673744..3674373 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| ABHL50_RS17765 (ABHL50_17765) | rpoZ | 3674446..3674724 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ABHL50_RS17770 (ABHL50_17770) | - | 3674763..3674892 (+) | 130 | Protein_3470 | hypothetical protein | - |
| ABHL50_RS17775 (ABHL50_17775) | - | 3674932..3677037 (+) | 2106 | WP_001117589.1 | HD domain-containing protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.43 Da Isoelectric Point: 8.5355
>NTDB_id=1003360 ABHL50_RS17750 WP_001214065.1 3672028..3672501(-) (fimU) [Acinetobacter baumannii strain 2024CK-00546]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1003360 ABHL50_RS17750 WP_001214065.1 3672028..3672501(-) (fimU) [Acinetobacter baumannii strain 2024CK-00546]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTGGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTGGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |