Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EL267_RS04890 Genome accession   NZ_LR134520
Coordinates   930515..930997 (+) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain NCTC13947     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 925515..935997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL267_RS04880 (NCTC13947_00952) rfbB 925988..927028 (+) 1041 WP_000277598.1 dTDP-glucose 4,6-dehydratase -
  EL267_RS04885 (NCTC13947_00953) hylB 927080..930298 (-) 3219 WP_000403403.1 hyaluronate lyase -
  EL267_RS04890 (NCTC13947_00954) mutX 930515..930997 (+) 483 WP_000163512.1 NUDIX hydrolase Machinery gene
  EL267_RS04895 (NCTC13947_00955) - 930987..931448 (+) 462 WP_000796045.1 NUDIX hydrolase -
  EL267_RS04900 (NCTC13947_00956) - 931540..932730 (+) 1191 WP_001081540.1 AI-2E family transporter -
  EL267_RS04905 (NCTC13947_00957) - 932720..933946 (+) 1227 WP_000934876.1 tetratricopeptide repeat protein -
  EL267_RS04910 (NCTC13947_00958) alsS 934056..935738 (+) 1683 WP_000140344.1 acetolactate synthase AlsS -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=1003347 EL267_RS04890 WP_000163512.1 930515..930997(+) (mutX) [Streptococcus agalactiae strain NCTC13947]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1003347 EL267_RS04890 WP_000163512.1 930515..930997(+) (mutX) [Streptococcus agalactiae strain NCTC13947]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712