Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EL254_RS06245 Genome accession   NZ_LR134512
Coordinates   1185234..1185716 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain NCTC13949     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1180234..1190716
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL254_RS06225 (NCTC13949_01242) alsS 1180493..1182175 (-) 1683 WP_000140346.1 acetolactate synthase AlsS -
  EL254_RS06230 (NCTC13949_01243) - 1182285..1183511 (-) 1227 WP_000934876.1 tetratricopeptide repeat protein -
  EL254_RS06235 (NCTC13949_01244) - 1183501..1184691 (-) 1191 WP_001081540.1 AI-2E family transporter -
  EL254_RS06240 (NCTC13949_01245) - 1184783..1185244 (-) 462 WP_000796045.1 NUDIX hydrolase -
  EL254_RS06245 (NCTC13949_01246) mutX 1185234..1185716 (-) 483 WP_000163512.1 NUDIX hydrolase Machinery gene
  EL254_RS06250 (NCTC13949_01247) hylB 1185933..1189151 (+) 3219 WP_000403401.1 hyaluronate lyase -
  EL254_RS06255 (NCTC13949_01248) rfbB 1189203..1190249 (-) 1047 WP_000134282.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=1003134 EL254_RS06245 WP_000163512.1 1185234..1185716(-) (mutX) [Streptococcus agalactiae strain NCTC13949]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1003134 EL254_RS06245 WP_000163512.1 1185234..1185716(-) (mutX) [Streptococcus agalactiae strain NCTC13949]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712

Multiple sequence alignment