Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABHM63_RS26680 Genome accession   NZ_CP156901
Coordinates   5750337..5750738 (-) Length   133 a.a.
NCBI ID   WP_003249324.1    Uniprot ID   A0AAD2W8A3
Organism   Pseudomonas kurunegalensis strain 2024CK-00038     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5745337..5755738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABHM63_RS26665 (ABHM63_26655) - 5747301..5749325 (-) 2025 WP_223817433.1 methyl-accepting chemotaxis protein -
  ABHM63_RS26670 (ABHM63_26660) - 5749373..5749927 (-) 555 WP_003249330.1 chemotaxis protein CheW -
  ABHM63_RS26675 (ABHM63_26665) pilH 5749924..5750289 (-) 366 WP_003249327.1 twitching motility response regulator PilH -
  ABHM63_RS26680 (ABHM63_26670) pilG 5750337..5750738 (-) 402 WP_003249324.1 response regulator Regulator
  ABHM63_RS26685 (ABHM63_26675) gshB 5750977..5751930 (+) 954 WP_003249322.1 glutathione synthase -
  ABHM63_RS26690 (ABHM63_26680) - 5752022..5752927 (+) 906 WP_003249319.1 energy transducer TonB -
  ABHM63_RS26695 (ABHM63_26685) - 5753092..5753661 (+) 570 WP_003249318.1 YqgE/AlgH family protein -
  ABHM63_RS26700 (ABHM63_26690) ruvX 5753661..5754086 (+) 426 WP_003249316.1 Holliday junction resolvase RuvX -
  ABHM63_RS26705 (ABHM63_26695) pyrR 5754136..5754654 (+) 519 WP_003249313.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ABHM63_RS26710 (ABHM63_26700) - 5754667..5755671 (+) 1005 WP_003249311.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14632.88 Da        Isoelectric Point: 6.4772

>NTDB_id=1003130 ABHM63_RS26680 WP_003249324.1 5750337..5750738(-) (pilG) [Pseudomonas kurunegalensis strain 2024CK-00038]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFATPQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1003130 ABHM63_RS26680 WP_003249324.1 5750337..5750738(-) (pilG) [Pseudomonas kurunegalensis strain 2024CK-00038]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTAATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCATCAGCCCAGCATCATTTTCG
TCGATGTGCTGATGCCACGCCTGGACGGCTACCAGACCTGCGCGGTTATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTTATCCTGCTGTCGTCCCGCGATGGGCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGTTCCGATCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCATGTGCCCGGGTTCGCCACACCTCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632

Multiple sequence alignment