Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ABEF89_RS13225 Genome accession   NZ_CP156801
Coordinates   2725643..2727865 (+) Length   740 a.a.
NCBI ID   WP_034587858.1    Uniprot ID   A0A0A3VZJ9
Organism   Acinetobacter thermotolerans strain ANC 7892     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2720643..2732865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABEF89_RS13205 (ABEF89_13205) lnt 2721379..2722941 (+) 1563 WP_034587863.1 apolipoprotein N-acyltransferase -
  ABEF89_RS13210 (ABEF89_13210) - 2723109..2723444 (-) 336 WP_034587861.1 hypothetical protein -
  ABEF89_RS13215 (ABEF89_13215) gspG 2723728..2724195 (-) 468 WP_347454182.1 type II secretion system major pseudopilin GspG -
  ABEF89_RS13220 (ABEF89_13220) gspF 2724287..2725492 (-) 1206 WP_034587860.1 type II secretion system inner membrane protein GspF -
  ABEF89_RS13225 (ABEF89_13225) priA 2725643..2727865 (+) 2223 WP_034587858.1 primosomal protein N' Machinery gene
  ABEF89_RS13230 (ABEF89_13230) - 2727905..2729758 (+) 1854 WP_034587857.1 cation:proton antiporter -
  ABEF89_RS13235 (ABEF89_13235) hslO 2729809..2730684 (+) 876 WP_034587856.1 Hsp33 family molecular chaperone HslO -
  ABEF89_RS13240 (ABEF89_13240) - 2730795..2732099 (+) 1305 WP_347456362.1 IS4 family transposase -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83669.55 Da        Isoelectric Point: 8.6400

>NTDB_id=1002945 ABEF89_RS13225 WP_034587858.1 2725643..2727865(+) (priA) [Acinetobacter thermotolerans strain ANC 7892]
MPDQPVSPAPIYRVRVAVPVHLFDCFDYSLSAGQYQQAEVGARVAVSFGRQHLVGVIMEKLPPDAPLDSSFKLKDITELL
DDRAIIDAKVLNLLNWSAQYYQFPIGEVVQSALPTLLRQGKPYNLLARTWKLLDDQAEAKVRRSERQQEAYKILKLHPVG
TTETILNLAGVDTATLKALEKKGICECVLEAQDFSPPPVQLAQMPLTANPEQQHAIQQVLKYKNKYQAFLLDGLTGSGKT
EVYLQIMGKVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAETGKASIVLGTRSAIYTPM
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRGHLQQCPVVLGSATPSIDSYALVENGKMQVLELNQRAGAALMPKLHI
LDLKVAQKQHGISLHLIQEMQKRLDKKEQVLVFLNRRGYAPVLICDSCGWQAQCPHCDANFTVHRQPYQHLHCHHCGTIH
RMPDHCPSCNHTELKTLGMGTGKVEEQLNELFPNHEVIRVDRDSTSRVGSWQKIYDKIQKSEPAILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIVQVAGRAGRGERKGDVYLQTLRPDHALLNTLVNENYRAFAKQTLAQRQIARM
PPYRYAVMIRCESRDQNLNTEFLQKHAALLRQYQDLDLEIWGPIPAPMERKAGRYQSHMVLLSAERARLHYYVRAWWQAM
LQDKPSSMKLTLDVDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=1002945 ABEF89_RS13225 WP_034587858.1 2725643..2727865(+) (priA) [Acinetobacter thermotolerans strain ANC 7892]
ATGCCCGATCAGCCTGTTTCCCCTGCTCCGATTTATCGCGTCCGTGTCGCCGTGCCTGTACATCTGTTTGACTGTTTTGA
TTACAGCCTAAGTGCAGGACAATACCAGCAGGCCGAAGTTGGCGCACGCGTGGCAGTATCTTTTGGTCGGCAGCATCTGG
TTGGGGTAATTATGGAAAAATTGCCTCCAGATGCTCCATTGGATAGCAGTTTCAAGCTCAAAGACATTACCGAGCTGCTG
GATGATCGGGCGATTATTGATGCCAAAGTACTCAATCTGCTGAACTGGTCGGCGCAGTATTATCAGTTCCCGATTGGTGA
AGTGGTGCAAAGTGCCCTACCAACATTACTCCGTCAAGGCAAACCTTATAACCTGCTGGCACGTACCTGGAAACTGCTGG
ATGATCAGGCTGAAGCCAAAGTTCGTCGTTCCGAACGTCAGCAAGAAGCCTATAAGATTTTAAAACTGCATCCTGTCGGT
ACTACAGAAACCATATTGAATCTGGCGGGTGTTGATACCGCAACCCTGAAGGCTTTAGAGAAAAAAGGTATTTGTGAATG
TGTGCTGGAAGCGCAGGATTTTAGCCCACCACCTGTTCAGCTGGCACAGATGCCACTGACTGCAAACCCGGAACAGCAGC
ATGCCATTCAGCAGGTATTAAAATACAAAAATAAATACCAGGCTTTTTTGCTGGATGGCCTGACCGGCAGCGGCAAGACC
GAAGTCTATTTACAGATCATGGGAAAGGTACTGAAACAGGGCAAACAAGTGCTGGTACTGGTACCGGAAATTGGCCTGAC
CCCGCAAACCATCAGTCGTTTCCAATCACGCTTCCATTGCCATATTGCCCTGCTGCATTCTGGCCTGAATGACTCGAAAC
GTCTGCAAGCCTGGCAGGCCGCAGAAACCGGTAAAGCCTCGATCGTACTCGGCACCCGTTCTGCAATTTATACCCCAATG
CCGAATCTGGGCCTGATTATTCTGGATGAAGAACACGACCTGTCTTTTAAACAGCAGGAAGGCTTCCGCTATCATGCTCG
GGACGTGGCCCTGTATCGTGGACATTTACAGCAATGTCCCGTCGTGCTCGGTTCTGCCACGCCAAGCATCGACAGTTATG
CATTAGTGGAAAATGGCAAGATGCAGGTGCTGGAACTGAACCAGCGTGCCGGTGCGGCATTGATGCCAAAACTGCATATT
CTGGACCTGAAAGTTGCTCAGAAGCAGCATGGCATCAGTCTGCATTTGATTCAGGAAATGCAGAAACGGCTGGATAAAAA
GGAACAGGTATTGGTTTTCCTGAACCGTCGTGGTTATGCACCGGTACTGATCTGTGACAGCTGCGGCTGGCAGGCGCAAT
GCCCGCATTGTGATGCGAATTTCACGGTGCACCGCCAGCCTTATCAGCATCTGCATTGCCACCACTGTGGTACCATTCAC
CGCATGCCGGATCATTGTCCGAGCTGTAACCATACCGAACTAAAAACCCTAGGCATGGGCACCGGCAAGGTTGAAGAACA
GCTGAATGAACTCTTCCCGAATCATGAGGTGATCCGGGTCGATCGCGACTCGACCAGCCGGGTCGGCAGCTGGCAGAAAA
TCTATGACAAGATTCAGAAAAGCGAACCGGCAATTCTGCTCGGCACCCAAATGTTGGCCAAAGGTCACCATTTCCCTTAT
GTGACGCTGGTGGCAATCCTGGATATTGACTCTGGCCTGCTGAGTGTCGATTTTCGAGCCACGGAACGTACCGCCCAGCT
GATTGTACAGGTGGCGGGCCGTGCTGGCCGTGGTGAACGTAAAGGCGATGTCTATTTACAGACCTTGCGTCCCGATCATG
CCTTGCTGAATACTCTGGTCAATGAAAATTACCGTGCTTTCGCCAAACAGACATTGGCACAGCGGCAAATTGCCCGCATG
CCACCCTATCGCTATGCGGTGATGATCCGCTGTGAATCACGTGACCAGAACTTAAATACTGAATTCCTACAGAAACATGC
AGCGCTGTTGAGGCAATATCAGGACCTTGATCTAGAGATCTGGGGACCAATTCCGGCCCCCATGGAACGCAAGGCGGGAC
GTTACCAGTCGCATATGGTACTGCTCTCTGCTGAGCGTGCCCGCTTGCACTATTATGTCCGGGCATGGTGGCAGGCCATG
CTGCAGGATAAACCCTCTTCCATGAAACTCACGCTAGATGTCGATCCTCAAGAGCTGAGCTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

Type III restriction enzyme, res subunit (ResIII)

(209-369)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A3VZJ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

70.676

100

0.707

Multiple sequence alignment