Detailed information NTG1002933

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABEF89_RS08010
• Genome accession: NZ_CP156801
• Coordinates: 1651261..1652466 (-)
• Length: 401 a.a.
• NCBI ID: WP_347454159.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7892
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1646261..1657466

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF89_RS07990 (ABEF89_07990)	-	1647696..1648145 (+)	450	WP_347452718.1	MaoC family dehydratase	-
ABEF89_RS07995 (ABEF89_07995)	-	1648297..1649325 (+)	1029	WP_034588270.1	AraC family transcriptional regulator	-
ABEF89_RS08000 (ABEF89_08000)	gcvH	1649398..1649772 (+)	375	WP_347452719.1	glycine cleavage system protein GcvH	-
ABEF89_RS08005 (ABEF89_08005)	-	1650008..1651201 (+)	1194	WP_347452720.1	MFS transporter	-
ABEF89_RS08010 (ABEF89_08010)	pilU	1651261..1652466 (-)	1206	WP_347454159.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF89_RS08015 (ABEF89_08015)	pilU	1652772..1653950 (-)	1179	WP_034588275.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF89_RS08020 (ABEF89_08020)	-	1654163..1655212 (-)	1050	WP_034588278.1	3-deoxy-7-phosphoheptulonate synthase	-
ABEF89_RS08025 (ABEF89_08025)	-	1655985..1657094 (-)	1110	WP_034588280.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 45386.74 Da
• Isoelectric Point: 6.2782

>NTDB_id=1002933 ABEF89_RS08010 WP_347454159.1 1651261..1652466(-) (pilU) [Acinetobacter thermotolerans strain ANC 7892]
MFTAELLEEARKFMHHMLTKVVEYGGSDLFITADFPPSIKHQGLMKPFGQQNLTADKTKLFAYALMNEKQRQEYETELEC
NFAITVPGVSRFRVNVFQQQLNVGMVIRTITAEIPNFQKLKLPESLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTQDGQGRRAAVEIMLNTPLISDLILKGDFHELKAIMAKS
RELGMQTFDQALFDLYNEGAISYEEALRNADSTNELRLQIKLKSSRTNPELNNNPTSFSMVEEKKPEDEVDGESKTEEQT
S

Nucleotide

• Length: 1206 bp

>NTDB_id=1002933 ABEF89_RS08010 WP_347454159.1 1651261..1652466(-) (pilU) [Acinetobacter thermotolerans strain ANC 7892]
ATGTTCACGGCAGAGTTATTAGAAGAAGCACGTAAATTTATGCACCATATGCTCACCAAAGTGGTGGAATATGGTGGTTC
GGATTTATTTATTACTGCCGACTTTCCACCGAGTATCAAACATCAGGGGCTGATGAAACCTTTTGGTCAGCAAAACCTAA
CTGCAGATAAAACCAAGCTGTTTGCTTATGCGTTGATGAATGAAAAACAGCGTCAGGAATACGAAACTGAGCTGGAATGT
AACTTTGCCATTACCGTGCCGGGTGTTTCCCGTTTCCGTGTCAATGTTTTTCAGCAACAGCTCAATGTAGGAATGGTGAT
CCGTACCATTACTGCAGAAATTCCGAACTTCCAGAAACTGAAATTACCTGAATCACTCAAACATGTGATTATGGAAAAAC
GCGGGCTAGTATTGGTTGTTGGGGGGACTGGGTCTGGTAAATCGACCTCACTGGCAGCGATGATTGATTACCGGAATGAA
AATTCCGCCGGACATATCATTACCGTAGAAGATCCGGTGGAATATGTGCATAAGCATAAAAAGTCCATGATCACCCACCG
TGAAGTCGGTGTAGACAGTCACTCCTGGCACAATGCGCTAAAAAATACCCTACGTCAGGCGCCGGATGTGATTCTGATTG
GCGAGATCCGTGATACCGAAACCATGGAACACGCGATTGCCTTTGCCGAAACTGGACACTTATGTCTAGGAACACTACAT
GCCAACAACGCCAACCAGACTTTGGATCGGATTATTAACTTCTTCCCGGAAGAGCGCCGTAATCAGTTGTTGATGGATCT
GTCTTCCAATATGAAAGCCATTATTTCCCAGCGTCTAATTCGTACTCAAGATGGTCAAGGCCGTCGTGCAGCAGTGGAGA
TCATGTTAAATACGCCGCTGATTTCTGACCTGATTTTAAAAGGCGATTTCCATGAGTTGAAAGCAATTATGGCCAAATCC
CGTGAACTCGGTATGCAGACTTTCGATCAGGCACTGTTCGACTTGTACAACGAAGGGGCGATTTCTTATGAAGAGGCACT
ACGTAATGCAGATTCAACTAATGAATTGCGTTTACAAATTAAACTAAAAAGTAGTCGAACCAATCCTGAGTTGAATAATA
ATCCTACTTCATTCAGTATGGTTGAAGAGAAAAAGCCGGAAGATGAAGTTGATGGCGAAAGCAAGACTGAAGAACAGACT
TCTTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (116-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	60.057	86.783	0.521
pilU	Acinetobacter baylyi ADP1	56.145	89.277	0.501
pilU	Vibrio cholerae strain A1552	52.394	88.529	0.464