Detailed information NTG1002851

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABEF90_RS08985
• Genome accession: NZ_CP156793
• Coordinates: 1855149..1855781 (-)
• Length: 210 a.a.
• NCBI ID: WP_034587654.1
• Uniprot ID: A0A0A3W040
• Organism: Acinetobacter thermotolerans strain ANC 7914
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1850149..1860781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF90_RS08955 (ABEF90_08955)	-	1850559..1850990 (-)	432	WP_034587663.1	SRPBCC family protein	-
ABEF90_RS08960 (ABEF90_08960)	tadA	1851042..1851563 (-)	522	WP_034587661.1	tRNA adenosine(34) deaminase TadA	-
ABEF90_RS08965 (ABEF90_08965)	-	1851567..1852691 (-)	1125	WP_347473664.1	enoyl-CoA hydratase/isomerase family protein	-
ABEF90_RS08970 (ABEF90_08970)	ung	1852688..1853404 (-)	717	WP_034587658.1	uracil-DNA glycosylase	-
ABEF90_RS08975 (ABEF90_08975)	-	1853450..1854046 (-)	597	WP_034587657.1	6-carboxytetrahydropterin synthase	-
ABEF90_RS08980 (ABEF90_08980)	gspK	1854192..1855139 (-)	948	WP_034587656.1	type II secretion system minor pseudopilin GspK	-
ABEF90_RS08985 (ABEF90_08985)	xcpW	1855149..1855781 (-)	633	WP_034587654.1	type II secretion system protein GspJ	Machinery gene
ABEF90_RS08990 (ABEF90_08990)	xcpV	1855778..1856128 (-)	351	WP_034587674.1	type II secretion system protein GspI	Machinery gene
ABEF90_RS08995 (ABEF90_08995)	-	1856205..1856765 (-)	561	WP_347473924.1	type II secretion system protein	-
ABEF90_RS09000 (ABEF90_09000)	-	1856775..1857389 (-)	615	WP_034587650.1	TetR/AcrR family transcriptional regulator	-
ABEF90_RS09005 (ABEF90_09005)	-	1857433..1858206 (-)	774	WP_034587648.1	TatD family hydrolase	-
ABEF90_RS09010 (ABEF90_09010)	-	1858235..1858576 (-)	342	WP_034587646.1	PilZ domain-containing protein	-
ABEF90_RS09015 (ABEF90_09015)	-	1858592..1859578 (-)	987	WP_347473925.1	DNA polymerase III subunit delta'	-
ABEF90_RS09020 (ABEF90_09020)	kdsB	1859593..1860354 (-)	762	WP_034587642.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 210 a.a.
• Molecular weight: 24097.29 Da
• Isoelectric Point: 5.3100

>NTDB_id=1002851 ABEF90_RS08985 WP_034587654.1 1855149..1855781(-) (xcpW) [Acinetobacter thermotolerans strain ANC 7914]
MKKNGFTLVELLVAITIFVILSALGWRVFDHVRVTRDQNAVHEQKLNQLQQGYQQVLRDMVQTVPLTANFNGDIQPALVL
QNGRFNFSKMGVTDPLEQGIAPDERVEYQYRADEQKVYRLKYRNLNQTGRDQPESSVLISDVEQFQIIALNPNELSQWPE
SGLDLNKIENKQLLPKGIKINLMVQGGQYEWLFSLLNTDYLNNNNNTSSS

Nucleotide

• Length: 633 bp

>NTDB_id=1002851 ABEF90_RS08985 WP_034587654.1 1855149..1855781(-) (xcpW) [Acinetobacter thermotolerans strain ANC 7914]
ATGAAAAAGAATGGTTTTACTCTGGTTGAACTTCTGGTGGCGATTACAATTTTTGTAATCTTATCTGCATTGGGTTGGCG
GGTCTTTGATCATGTAAGGGTGACGCGTGATCAGAATGCAGTACATGAGCAGAAATTGAACCAGTTGCAGCAAGGCTATC
AGCAGGTTTTGCGTGATATGGTGCAAACTGTACCTTTAACCGCAAATTTTAATGGCGATATTCAGCCAGCTTTGGTGTTG
CAAAATGGTCGCTTTAATTTCAGTAAAATGGGCGTGACGGATCCATTGGAACAAGGCATTGCACCAGATGAGCGGGTGGA
ATACCAATACCGAGCCGATGAGCAGAAAGTCTATCGATTAAAATATAGGAATTTGAACCAGACTGGACGTGATCAGCCAG
AATCCAGTGTGCTCATTAGTGATGTCGAGCAGTTCCAGATTATCGCACTCAATCCAAATGAATTAAGCCAATGGCCTGAA
AGCGGATTAGATTTAAATAAAATTGAAAACAAGCAACTGTTACCTAAAGGCATCAAGATTAATCTGATGGTGCAGGGGGG
GCAGTATGAGTGGCTGTTTAGCCTGCTGAATACTGATTATCTTAATAATAACAATAACACCAGCAGTTCTTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (2-24)

• Type II secretion system (T2SS), protein J (T2SSJ) (58-193)

3D structure

• AlphaFold DB: A0A0A3W040

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	55.155	92.381	0.51