Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ABEF87_RS14000 Genome accession   NZ_CP156789
Coordinates   2831455..2833677 (+) Length   740 a.a.
NCBI ID   WP_034587858.1    Uniprot ID   A0A0A3VZJ9
Organism   Acinetobacter thermotolerans strain ANC 7919     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2826455..2838677
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABEF87_RS13980 (ABEF87_13980) lnt 2827210..2828772 (+) 1563 WP_347455349.1 apolipoprotein N-acyltransferase -
  ABEF87_RS13985 (ABEF87_13985) - 2828927..2829256 (-) 330 WP_347455350.1 hypothetical protein -
  ABEF87_RS13990 (ABEF87_13990) gspG 2829540..2830007 (-) 468 WP_347455810.1 type II secretion system major pseudopilin GspG -
  ABEF87_RS13995 (ABEF87_13995) gspF 2830099..2831304 (-) 1206 WP_347455351.1 type II secretion system inner membrane protein GspF -
  ABEF87_RS14000 (ABEF87_14000) priA 2831455..2833677 (+) 2223 WP_034587858.1 primosomal protein N' Machinery gene
  ABEF87_RS14005 (ABEF87_14005) - 2833717..2835570 (+) 1854 WP_034587857.1 cation:proton antiporter -
  ABEF87_RS14010 (ABEF87_14010) hslO 2835621..2836496 (+) 876 WP_034587856.1 Hsp33 family molecular chaperone HslO -
  ABEF87_RS14015 (ABEF87_14015) - 2836607..2837911 (+) 1305 WP_035269493.1 IS4 family transposase -
  ABEF87_RS14020 (ABEF87_14020) - 2838104..2838553 (+) 450 WP_034587043.1 DUF2147 domain-containing protein -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83669.55 Da        Isoelectric Point: 8.6400

>NTDB_id=1002823 ABEF87_RS14000 WP_034587858.1 2831455..2833677(+) (priA) [Acinetobacter thermotolerans strain ANC 7919]
MPDQPVSPAPIYRVRVAVPVHLFDCFDYSLSAGQYQQAEVGARVAVSFGRQHLVGVIMEKLPPDAPLDSSFKLKDITELL
DDRAIIDAKVLNLLNWSAQYYQFPIGEVVQSALPTLLRQGKPYNLLARTWKLLDDQAEAKVRRSERQQEAYKILKLHPVG
TTETILNLAGVDTATLKALEKKGICECVLEAQDFSPPPVQLAQMPLTANPEQQHAIQQVLKYKNKYQAFLLDGLTGSGKT
EVYLQIMGKVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAETGKASIVLGTRSAIYTPM
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRGHLQQCPVVLGSATPSIDSYALVENGKMQVLELNQRAGAALMPKLHI
LDLKVAQKQHGISLHLIQEMQKRLDKKEQVLVFLNRRGYAPVLICDSCGWQAQCPHCDANFTVHRQPYQHLHCHHCGTIH
RMPDHCPSCNHTELKTLGMGTGKVEEQLNELFPNHEVIRVDRDSTSRVGSWQKIYDKIQKSEPAILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIVQVAGRAGRGERKGDVYLQTLRPDHALLNTLVNENYRAFAKQTLAQRQIARM
PPYRYAVMIRCESRDQNLNTEFLQKHAALLRQYQDLDLEIWGPIPAPMERKAGRYQSHMVLLSAERARLHYYVRAWWQAM
LQDKPSSMKLTLDVDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=1002823 ABEF87_RS14000 WP_034587858.1 2831455..2833677(+) (priA) [Acinetobacter thermotolerans strain ANC 7919]
ATGCCCGATCAGCCTGTTTCCCCTGCTCCGATTTATCGCGTCCGTGTCGCCGTGCCTGTACATCTGTTTGACTGTTTTGA
TTACAGCCTAAGTGCAGGACAATACCAGCAGGCCGAAGTTGGCGCACGCGTGGCAGTATCTTTTGGTCGGCAGCATCTGG
TTGGGGTAATTATGGAAAAATTGCCTCCAGATGCTCCATTGGATAGCAGTTTCAAGCTCAAAGACATTACCGAGCTGCTG
GATGATCGGGCGATTATTGATGCCAAAGTACTCAATCTGCTGAACTGGTCGGCGCAGTATTATCAGTTCCCGATTGGTGA
AGTGGTGCAAAGTGCCCTACCAACATTACTCCGTCAAGGCAAACCTTATAACCTGCTGGCACGTACCTGGAAACTGCTGG
ATGATCAGGCTGAAGCCAAAGTTCGTCGTTCCGAACGTCAGCAAGAAGCCTATAAGATTTTAAAACTGCATCCTGTCGGT
ACTACAGAAACCATATTGAATCTGGCGGGTGTTGATACCGCAACCCTGAAGGCTTTAGAGAAAAAAGGTATTTGTGAATG
TGTGCTGGAAGCGCAGGATTTTAGCCCACCACCTGTTCAGCTGGCACAGATGCCACTGACTGCAAACCCGGAACAGCAGC
ATGCCATTCAGCAGGTATTAAAATACAAAAATAAATACCAGGCTTTTTTGCTGGATGGCCTGACCGGCAGCGGCAAGACC
GAAGTCTATTTACAGATCATGGGAAAGGTACTGAAACAGGGCAAACAAGTGCTGGTACTGGTACCGGAAATTGGCCTGAC
CCCGCAAACCATCAGTCGTTTCCAATCACGCTTCCATTGCCATATTGCCCTGCTGCATTCTGGCCTGAATGACTCGAAAC
GTCTGCAAGCCTGGCAGGCCGCAGAAACCGGTAAAGCCTCGATCGTACTCGGCACCCGTTCTGCAATTTATACCCCAATG
CCGAATCTGGGCCTGATTATTCTGGATGAAGAACACGACCTGTCTTTTAAACAGCAGGAAGGCTTCCGCTATCATGCTCG
GGACGTGGCCCTGTATCGTGGACATTTACAGCAATGTCCCGTCGTGCTCGGTTCTGCCACGCCAAGCATCGACAGTTATG
CATTAGTGGAAAATGGCAAGATGCAGGTGCTGGAACTGAACCAGCGTGCCGGTGCGGCATTGATGCCAAAACTGCATATT
CTGGACCTGAAAGTTGCTCAGAAGCAGCATGGCATCAGTCTGCATTTGATTCAGGAAATGCAGAAACGGCTGGATAAAAA
GGAACAGGTATTGGTTTTCCTGAACCGTCGTGGTTATGCACCGGTACTGATCTGTGACAGCTGCGGCTGGCAGGCGCAAT
GCCCGCATTGTGATGCGAATTTCACGGTGCACCGCCAGCCTTATCAGCATCTGCATTGCCACCACTGTGGTACCATTCAC
CGCATGCCGGATCATTGTCCGAGCTGTAACCATACCGAACTAAAAACCCTAGGCATGGGCACCGGCAAGGTTGAAGAACA
GCTGAATGAACTCTTCCCGAATCATGAGGTGATCCGGGTCGATCGCGACTCGACCAGCCGGGTCGGCAGCTGGCAGAAAA
TCTATGACAAGATTCAGAAAAGCGAACCGGCAATTCTGCTCGGCACCCAAATGTTGGCCAAAGGTCACCATTTCCCTTAT
GTGACGCTGGTGGCAATCCTGGATATTGACTCTGGCCTGCTGAGTGTCGATTTTCGAGCCACGGAACGTACCGCCCAGCT
GATTGTACAGGTGGCGGGCCGTGCTGGCCGTGGTGAACGTAAAGGCGATGTCTATTTACAGACCTTGCGTCCCGATCATG
CCTTGCTGAATACTCTGGTCAATGAAAATTACCGTGCTTTCGCCAAACAGACATTGGCACAGCGGCAAATTGCCCGCATG
CCACCCTATCGCTATGCGGTGATGATCCGCTGTGAATCACGTGACCAGAACTTAAATACTGAATTCCTACAGAAACATGC
AGCGCTGTTGAGGCAATATCAGGACCTTGATCTAGAGATCTGGGGACCAATTCCGGCCCCCATGGAACGCAAGGCGGGAC
GTTACCAGTCGCATATGGTACTGCTCTCTGCTGAGCGTGCCCGCTTGCACTATTATGTCCGGGCATGGTGGCAGGCCATG
CTGCAGGATAAACCCTCTTCCATGAAACTCACGCTAGATGTCGATCCTCAAGAGCTGAGCTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

Type III restriction enzyme, res subunit (ResIII)

(209-369)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A3VZJ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

70.676

100

0.707

Multiple sequence alignment