Detailed information NTG1002813

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABEF87_RS09490
• Genome accession: NZ_CP156789
• Coordinates: 1911456..1912088 (-)
• Length: 210 a.a.
• NCBI ID: WP_034587654.1
• Uniprot ID: A0A0A3W040
• Organism: Acinetobacter thermotolerans strain ANC 7919
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1906456..1917088

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF87_RS09460 (ABEF87_09460)	-	1906866..1907297 (-)	432	WP_034587663.1	SRPBCC family protein	-
ABEF87_RS09465 (ABEF87_09465)	tadA	1907349..1907870 (-)	522	WP_034587661.1	tRNA adenosine(34) deaminase TadA	-
ABEF87_RS09470 (ABEF87_09470)	-	1907874..1908998 (-)	1125	WP_034587659.1	enoyl-CoA hydratase/isomerase family protein	-
ABEF87_RS09475 (ABEF87_09475)	ung	1908995..1909711 (-)	717	WP_034587658.1	uracil-DNA glycosylase	-
ABEF87_RS09480 (ABEF87_09480)	-	1909757..1910353 (-)	597	WP_034587657.1	6-carboxytetrahydropterin synthase	-
ABEF87_RS09485 (ABEF87_09485)	gspK	1910499..1911446 (-)	948	WP_347455176.1	type II secretion system minor pseudopilin GspK	-
ABEF87_RS09490 (ABEF87_09490)	xcpW	1911456..1912088 (-)	633	WP_034587654.1	type II secretion system protein GspJ	Machinery gene
ABEF87_RS09495 (ABEF87_09495)	xcpV	1912085..1912435 (-)	351	WP_034587674.1	type II secretion system protein GspI	Machinery gene
ABEF87_RS09500 (ABEF87_09500)	-	1912512..1913072 (-)	561	WP_034587652.1	Tfp pilus assembly protein FimT/FimU	-
ABEF87_RS09505 (ABEF87_09505)	-	1913082..1913696 (-)	615	WP_034587650.1	TetR/AcrR family transcriptional regulator	-
ABEF87_RS09510 (ABEF87_09510)	-	1913740..1914513 (-)	774	WP_034587648.1	TatD family hydrolase	-
ABEF87_RS09515 (ABEF87_09515)	-	1914542..1914883 (-)	342	WP_034587646.1	PilZ domain-containing protein	-
ABEF87_RS09520 (ABEF87_09520)	-	1914899..1915885 (-)	987	WP_034587644.1	DNA polymerase III subunit delta'	-
ABEF87_RS09525 (ABEF87_09525)	kdsB	1915900..1916661 (-)	762	WP_034587642.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 210 a.a.
• Molecular weight: 24097.29 Da
• Isoelectric Point: 5.3100

>NTDB_id=1002813 ABEF87_RS09490 WP_034587654.1 1911456..1912088(-) (xcpW) [Acinetobacter thermotolerans strain ANC 7919]
MKKNGFTLVELLVAITIFVILSALGWRVFDHVRVTRDQNAVHEQKLNQLQQGYQQVLRDMVQTVPLTANFNGDIQPALVL
QNGRFNFSKMGVTDPLEQGIAPDERVEYQYRADEQKVYRLKYRNLNQTGRDQPESSVLISDVEQFQIIALNPNELSQWPE
SGLDLNKIENKQLLPKGIKINLMVQGGQYEWLFSLLNTDYLNNNNNTSSS

Nucleotide

• Length: 633 bp

>NTDB_id=1002813 ABEF87_RS09490 WP_034587654.1 1911456..1912088(-) (xcpW) [Acinetobacter thermotolerans strain ANC 7919]
ATGAAAAAGAATGGTTTTACTCTGGTTGAACTTCTGGTGGCGATTACAATTTTTGTAATCTTATCTGCATTGGGTTGGCG
GGTCTTTGATCATGTAAGGGTGACGCGTGATCAGAATGCAGTACATGAGCAGAAATTGAACCAGTTGCAGCAAGGCTATC
AGCAGGTTTTGCGTGATATGGTGCAAACTGTACCTTTAACCGCAAATTTTAATGGCGATATTCAGCCAGCTTTGGTGTTG
CAAAATGGTCGCTTTAATTTCAGTAAAATGGGCGTGACGGATCCATTGGAACAAGGCATTGCACCAGATGAGCGGGTGGA
ATACCAATACCGAGCCGATGAGCAGAAAGTCTATCGATTAAAATATAGGAATTTGAACCAGACTGGACGTGATCAGCCAG
AATCCAGTGTGCTCATTAGTGATGTCGAGCAGTTCCAGATTATCGCACTCAATCCAAATGAATTAAGCCAATGGCCTGAA
AGCGGATTAGATTTAAATAAAATTGAAAACAAGCAACTGTTACCTAAAGGCATCAAGATTAATCTGATGGTGCAGGGGGG
GCAGTATGAGTGGCTGTTTAGCCTGCTGAATACTGATTATCTTAATAATAACAATAACACCAGCAGTTCTTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (2-24)

• Type II secretion system (T2SS), protein J (T2SSJ) (58-193)

3D structure

• AlphaFold DB: A0A0A3W040

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	55.155	92.381	0.51