Detailed information NTG1002786

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: EL232_RS07160
• Genome accession: NZ_LR134498
• Coordinates: 1319186..1320136 (-)
• Length: 316 a.a.
• NCBI ID: WP_126418116.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain NCTC13265
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1314186..1325136

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL232_RS07125 (NCTC13265_01442)	ccoS	1314375..1314581 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
EL232_RS07130 (NCTC13265_01443)	-	1314604..1314906 (-)	303	WP_002852762.1	cytochrome c	-
EL232_RS07135 (NCTC13265_01444)	gmhB	1314987..1315551 (+)	565	Protein_1376	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
EL232_RS07140 (NCTC13265_01445)	rfaD	1315548..1316501 (+)	954	WP_002873533.1	ADP-glyceromanno-heptose 6-epimerase	-
EL232_RS07145 (NCTC13265_01446)	rfaE1	1316494..1317879 (+)	1386	WP_126418114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
EL232_RS07150 (NCTC13265_01447)	gmhA	1317876..1318436 (+)	561	WP_002842583.1	D-sedoheptulose 7-phosphate isomerase	-
EL232_RS07155 (NCTC13265_01448)	-	1318436..1319200 (+)	765	WP_002873535.1	glycosyltransferase family 25 protein	-
EL232_RS07160 (NCTC13265_01449)	waaF	1319186..1320136 (-)	951	WP_126418116.1	lipopolysaccharide heptosyltransferase II	Regulator
EL232_RS07165 (NCTC13265_01450)	-	1320195..1321016 (+)	822	WP_002872237.1	glycosyltransferase family 2 protein	-
EL232_RS07170 (NCTC13265_01451)	-	1321065..1322210 (+)	1146	WP_002872236.1	glycosyltransferase family 8 protein	-
EL232_RS07175 (NCTC13265_01452)	-	1322236..1323123 (+)	888	WP_002872235.1	glycosyltransferase family 2 protein	-
EL232_RS07180 (NCTC13265_01453)	-	1323092..1324642 (-)	1551	WP_126418118.1	glycosyltransferase	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36293.86 Da
• Isoelectric Point: 10.3316

>NTDB_id=1002786 EL232_RS07160 WP_126418116.1 1319186..1320136(-) (waaF) [Campylobacter jejuni strain NCTC13265]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=1002786 EL232_RS07160 WP_126418116.1 1319186..1320136(-) (waaF) [Campylobacter jejuni strain NCTC13265]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCACGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.291	99.051	0.924