Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABEF86_RS06130 | Genome accession | NZ_CP156780 |
| Coordinates | 1244817..1245167 (+) | Length | 116 a.a. |
| NCBI ID | WP_347454970.1 | Uniprot ID | - |
| Organism | Acinetobacter thermotolerans strain ANC 7933 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1239817..1250167
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABEF86_RS06100 (ABEF86_06100) | kdsB | 1240591..1241352 (+) | 762 | WP_034587642.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ABEF86_RS06105 (ABEF86_06105) | - | 1241367..1242353 (+) | 987 | WP_034587644.1 | DNA polymerase III subunit delta' | - |
| ABEF86_RS06110 (ABEF86_06110) | - | 1242369..1242710 (+) | 342 | WP_034587646.1 | PilZ domain-containing protein | - |
| ABEF86_RS06115 (ABEF86_06115) | - | 1242739..1243512 (+) | 774 | WP_347454887.1 | TatD family hydrolase | - |
| ABEF86_RS06120 (ABEF86_06120) | - | 1243556..1244170 (+) | 615 | WP_034587650.1 | TetR/AcrR family transcriptional regulator | - |
| ABEF86_RS06125 (ABEF86_06125) | - | 1244180..1244740 (+) | 561 | WP_034587652.1 | Tfp pilus assembly protein FimT/FimU | - |
| ABEF86_RS06130 (ABEF86_06130) | xcpV | 1244817..1245167 (+) | 351 | WP_347454970.1 | type II secretion system protein | Machinery gene |
| ABEF86_RS06135 (ABEF86_06135) | xcpW | 1245164..1245796 (+) | 633 | WP_347454888.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABEF86_RS06140 (ABEF86_06140) | gspK | 1245806..1246753 (+) | 948 | WP_347454889.1 | type II secretion system minor pseudopilin GspK | - |
| ABEF86_RS06145 (ABEF86_06145) | - | 1246899..1247495 (+) | 597 | WP_347454890.1 | 6-carboxytetrahydropterin synthase | - |
| ABEF86_RS06150 (ABEF86_06150) | ung | 1247541..1248257 (+) | 717 | WP_347454891.1 | uracil-DNA glycosylase | - |
| ABEF86_RS06155 (ABEF86_06155) | - | 1248254..1249378 (+) | 1125 | WP_034587659.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABEF86_RS06160 (ABEF86_06160) | tadA | 1249382..1249903 (+) | 522 | WP_347452842.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 116 a.a. Molecular weight: 12736.41 Da Isoelectric Point: 7.2026
>NTDB_id=1002712 ABEF86_RS06130 WP_347454970.1 1244817..1245167(+) (xcpV) [Acinetobacter thermotolerans strain ANC 7933]
MVALAIFATAAMALTKVAMQYTQSTAHAILRTKAQFVALNEAAQMEINQEWLTGTSSRRTIQQGETWQIDKKSEPTISPN
VQRVDIQVGIVNADTGQVESGVSSLVFFNHRANQTQ
MVALAIFATAAMALTKVAMQYTQSTAHAILRTKAQFVALNEAAQMEINQEWLTGTSSRRTIQQGETWQIDKKSEPTISPN
VQRVDIQVGIVNADTGQVESGVSSLVFFNHRANQTQ
Nucleotide
Download Length: 351 bp
>NTDB_id=1002712 ABEF86_RS06130 WP_347454970.1 1244817..1245167(+) (xcpV) [Acinetobacter thermotolerans strain ANC 7933]
ATGGTGGCACTTGCGATTTTTGCCACTGCAGCGATGGCATTGACCAAGGTCGCGATGCAATATACCCAATCTACGGCACA
TGCCATTTTGCGTACCAAAGCCCAGTTTGTGGCTCTAAATGAAGCTGCACAAATGGAGATTAATCAGGAATGGTTGACTG
GAACTTCATCTCGACGAACTATACAGCAGGGTGAAACCTGGCAGATTGATAAAAAATCTGAACCGACGATTAGTCCCAAT
GTGCAACGTGTGGATATTCAGGTCGGCATCGTCAATGCAGATACCGGGCAGGTGGAATCAGGTGTCAGTAGTCTGGTGTT
CTTTAATCATCGGGCGAATCAGACACAATGA
ATGGTGGCACTTGCGATTTTTGCCACTGCAGCGATGGCATTGACCAAGGTCGCGATGCAATATACCCAATCTACGGCACA
TGCCATTTTGCGTACCAAAGCCCAGTTTGTGGCTCTAAATGAAGCTGCACAAATGGAGATTAATCAGGAATGGTTGACTG
GAACTTCATCTCGACGAACTATACAGCAGGGTGAAACCTGGCAGATTGATAAAAAATCTGAACCGACGATTAGTCCCAAT
GTGCAACGTGTGGATATTCAGGTCGGCATCGTCAATGCAGATACCGGGCAGGTGGAATCAGGTGTCAGTAGTCTGGTGTT
CTTTAATCATCGGGCGAATCAGACACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
68.182 |
94.828 |
0.647 |