Detailed information NTG1002548

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABEF83_RS05820
• Genome accession: NZ_CP156768
• Coordinates: 1210159..1210791 (+)
• Length: 210 a.a.
• NCBI ID: WP_347454888.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7974
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1205159..1215791

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF83_RS05785 (ABEF83_05785)	kdsB	1205586..1206347 (+)	762	WP_034587642.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ABEF83_RS05790 (ABEF83_05790)	-	1206362..1207348 (+)	987	WP_034587644.1	DNA polymerase III subunit delta'	-
ABEF83_RS05795 (ABEF83_05795)	-	1207364..1207705 (+)	342	WP_034587646.1	PilZ domain-containing protein	-
ABEF83_RS05800 (ABEF83_05800)	-	1207734..1208507 (+)	774	WP_347454887.1	TatD family hydrolase	-
ABEF83_RS05805 (ABEF83_05805)	-	1208551..1209165 (+)	615	WP_034587650.1	TetR/AcrR family transcriptional regulator	-
ABEF83_RS05810 (ABEF83_05810)	-	1209175..1209735 (+)	561	WP_034587652.1	Tfp pilus assembly protein FimT/FimU	-
ABEF83_RS05815 (ABEF83_05815)	xcpV	1209812..1210162 (+)	351	WP_347454970.1	type II secretion system protein	Machinery gene
ABEF83_RS05820 (ABEF83_05820)	xcpW	1210159..1210791 (+)	633	WP_347454888.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABEF83_RS05825 (ABEF83_05825)	gspK	1210801..1211748 (+)	948	WP_347454889.1	type II secretion system minor pseudopilin GspK	-
ABEF83_RS05830 (ABEF83_05830)	-	1211894..1212490 (+)	597	WP_347454890.1	6-carboxytetrahydropterin synthase	-
ABEF83_RS05835 (ABEF83_05835)	ung	1212536..1213252 (+)	717	WP_347454891.1	uracil-DNA glycosylase	-
ABEF83_RS05840 (ABEF83_05840)	-	1213249..1214373 (+)	1125	WP_034587659.1	enoyl-CoA hydratase/isomerase family protein	-
ABEF83_RS05845 (ABEF83_05845)	tadA	1214377..1214898 (+)	522	WP_347452842.1	tRNA adenosine(34) deaminase TadA	-
ABEF83_RS05850 (ABEF83_05850)	-	1214950..1215381 (+)	432	WP_347452841.1	SRPBCC family protein	-

Sequence

Protein

• Length: 210 a.a.
• Molecular weight: 24069.20 Da
• Isoelectric Point: 5.0272

>NTDB_id=1002548 ABEF83_RS05820 WP_347454888.1 1210159..1210791(+) (xcpW) [Acinetobacter thermotolerans strain ANC 7974]
MNKNGFTLVELLVAIAIFAILSALGWRVFDHVRMTRDQNAVHEQKLNQLQQGYQQVLRDMVQTVPLTANFNGDIQPALVL
QNGRFNFSKMGVTDPLEQGIAPDERVEYQYRADEQKVYRLKYRNLNQTGRDQPESSVLISDVEQFQITALNPNELSQWPE
SGLDLNKIENKQLLPKGIKINLTVQGVQYEWLFSLLNTDYLNNNNNISSS

Nucleotide

• Length: 633 bp

>NTDB_id=1002548 ABEF83_RS05820 WP_347454888.1 1210159..1210791(+) (xcpW) [Acinetobacter thermotolerans strain ANC 7974]
ATGAATAAAAACGGTTTTACTCTGGTCGAGCTTCTGGTTGCGATTGCAATTTTTGCGATTCTCTCTGCATTGGGCTGGCG
GGTCTTTGATCATGTGAGAATGACTCGTGATCAGAATGCAGTACATGAGCAGAAATTGAACCAGTTGCAGCAAGGCTATC
AGCAGGTTTTGCGTGATATGGTGCAAACTGTACCTTTAACCGCAAATTTTAATGGCGATATTCAGCCAGCTTTGGTGTTG
CAAAATGGTCGCTTTAATTTCAGTAAAATGGGCGTGACGGATCCATTGGAACAAGGCATTGCACCAGATGAGCGGGTGGA
ATACCAATACCGAGCCGATGAGCAGAAAGTCTATCGATTAAAATATAGGAATTTGAACCAGACTGGACGTGATCAGCCAG
AATCCAGTGTGCTCATTAGTGATGTTGAGCAGTTCCAGATTACCGCACTCAATCCAAACGAATTAAGCCAATGGCCTGAA
AGCGGATTAGATTTAAATAAAATCGAAAACAAGCAACTGTTGCCTAAAGGCATCAAGATCAATCTGACGGTACAGGGCGT
ACAGTATGAATGGCTGTTTAGCCTGCTGAATACTGATTATCTTAATAATAACAATAATATTAGCAGTTCTTAG

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (58-192)

• Prokaryotic N-terminal methylation motif (N_methyl) (2-24)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	57.812	91.429	0.529