Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ABEF83_RS03575 Genome accession   NZ_CP156768
Coordinates   768330..772826 (+) Length   1498 a.a.
NCBI ID   WP_347453014.1    Uniprot ID   -
Organism   Acinetobacter thermotolerans strain ANC 7974     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 763330..777826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABEF83_RS03550 (ABEF83_03550) - 763745..764401 (-) 657 WP_034583329.1 hypothetical protein -
  ABEF83_RS03555 (ABEF83_03555) pilG 764721..765104 (+) 384 WP_034583327.1 twitching motility response regulator PilG Regulator
  ABEF83_RS03560 (ABEF83_03560) - 765135..765503 (+) 369 WP_034583325.1 response regulator -
  ABEF83_RS03565 (ABEF83_03565) - 765510..766046 (+) 537 WP_034583323.1 chemotaxis protein CheW -
  ABEF83_RS03570 (ABEF83_03570) - 766092..768164 (+) 2073 WP_347453015.1 methyl-accepting chemotaxis protein -
  ABEF83_RS03575 (ABEF83_03575) chpA 768330..772826 (+) 4497 WP_347453014.1 Hpt domain-containing protein Regulator
  ABEF83_RS03580 (ABEF83_03580) - 772830..773288 (+) 459 WP_347453013.1 hypothetical protein -
  ABEF83_RS03585 (ABEF83_03585) dapE 773357..774493 (-) 1137 WP_034583312.1 succinyl-diaminopimelate desuccinylase -
  ABEF83_RS03590 (ABEF83_03590) - 774617..774766 (-) 150 WP_034583309.1 entericidin A/B family lipoprotein -
  ABEF83_RS03595 (ABEF83_03595) - 774903..775751 (-) 849 WP_347453012.1 DUF1853 family protein -
  ABEF83_RS03600 (ABEF83_03600) - 775840..776238 (+) 399 WP_034583304.1 YbaN family protein -
  ABEF83_RS03605 (ABEF83_03605) elsL 776242..776748 (+) 507 WP_034583302.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1498 a.a.        Molecular weight: 166889.44 Da        Isoelectric Point: 4.1987

>NTDB_id=1002545 ABEF83_RS03575 WP_347453014.1 768330..772826(+) (chpA) [Acinetobacter thermotolerans strain ANC 7974]
MKEILKDLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELNALFPQWLATPDHKETLTTIRRHFHTLKGSGRMVGAKQA
GEIAWTVEDTLNRVLSGTLELTPTIQKFAQATLNVYQYLLYPCFKQTQPLTVDLRPIVLLGQQLQQQQTPEPELEELLQL
ADTLTAEGQYSGLELADTTEETPNVETPVNEVTAEEAIETVETVAEERSDLEETVAIFIEEAEEHLATIYDFLKHENIAK
QDYNSLIRALHTLRGSSSMAQIDQIFDASSKVENLFKTLVQDEIASTSKEIALLQQYSEFVGDYLHLLRQGKTEQLDAIS
ATFDAAWNDYGFITTEDHDAVQSQGLVSRLVELNIDQLLDAEFEFDRRAVEEYPAYIEALSQQAAELVAHTDNRAAVGIH
EFASQLKAAYDALIHRPVLLQSDYAFELFAQAHQEFIHLFDTLAAGQRVILSAEVEKLLADLSAFVQQEIEEFEPEAAPE
TVVEAPEAAPVATGSVDFAAISQCMDLDRQQSEYDASNRDFDADLLDIFLEEADELLAGIDEDLNTWAREPENTESLNNL
MRYLHTLKGGANMIAATNIGSIAHELESIYERVIRQQIAVSPALIQIVRLVQDSVSDRIQTIRDELIDYPATETINILQN
IQALAAGTATATTAVDTAVVEPVVAVEAESEEDSEEIAVEAESTESVAEISEPEILLDPVEETVVEEVAAASVEPVSEED
ELKAIVAETFREESEEILGNAEKLLEQWFDQRSDRSLLLQLQRAAHSIKGGARMAGDETIATIAYGLETTFEQFAVHHFN
SNAYDSLLQQTWKWLAQAIFKHDYSGFEQIKTALDAIEFVDVTAQLPERLTKTESLDITTGFEFVQGDGTEPPNMMGEWA
ETAASDNSNEMIRISADLVEKMINLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELETQIIAKHGAEN
SRYTDFDPLEMDQYSSLNQLSKSLAESASDLIDFKSTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQR
IVRQTSTTLNRPAELIVQNTEGELDRNILERLVSPFEHMLRNAIDHGLEDTAERIALNKPEVGSIVLNISRQGTDVLISF
SDDGKGIDSEAIRAKAIAKGLLKEEQQVDQEELLQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVSVKSELGK
GTTFTIRVPTTVAVSDALMVKAGDQQYAISLAQIDRIVRIAPTTLETYFNSKDDYFKIDGVNYKLRYLSEFVANQPVPRL
NNIANSLPVLLIKGNNGQSIALLVDQLVGSRAQIVVKPIGQQFANIGVVAGATILGDGSVCLILDGQNVARQAQATQRIK
QVSDQQDLSRRGNARRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTNL
VRHHDIHRNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQELIAAQQG

Nucleotide


Download         Length: 4497 bp        

>NTDB_id=1002545 ABEF83_RS03575 WP_347453014.1 768330..772826(+) (chpA) [Acinetobacter thermotolerans strain ANC 7974]
ATGAAAGAAATATTAAAAGACTTAGTTGAAACGACAGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCTGAAATTTT
AGAAATTTTCGTCGAAGAGATTGAAGAAATCTTTGTCGAGTTAAACGCTTTATTTCCACAGTGGCTTGCCACACCAGATC
ATAAAGAAACACTGACGACCATTCGCCGCCATTTCCATACCTTAAAAGGTTCAGGGCGTATGGTGGGGGCGAAACAGGCC
GGTGAAATTGCCTGGACAGTTGAAGATACCCTCAACCGGGTATTGTCAGGCACACTTGAACTGACACCAACTATTCAAAA
GTTTGCTCAGGCAACTTTGAATGTCTATCAATACCTGTTGTATCCATGCTTTAAACAGACACAACCATTAACCGTGGATC
TGCGCCCAATCGTATTGCTTGGGCAGCAACTGCAACAGCAGCAGACCCCAGAACCAGAATTAGAAGAATTATTACAGCTG
GCAGATACACTGACGGCTGAAGGCCAATACTCTGGTCTTGAACTTGCAGATACAACAGAAGAAACGCCTAACGTTGAAAC
TCCTGTAAATGAGGTTACGGCTGAAGAAGCAATAGAGACTGTTGAAACCGTTGCAGAGGAACGTAGCGATCTGGAAGAAA
CGGTTGCGATCTTTATTGAAGAAGCTGAAGAGCATCTGGCAACGATTTATGACTTCCTGAAGCATGAAAATATTGCCAAG
CAGGATTACAACAGTCTGATTCGTGCGCTGCATACCCTGCGTGGCAGTTCATCTATGGCGCAGATTGACCAGATTTTTGA
TGCCAGCTCTAAGGTTGAAAACCTGTTTAAAACACTGGTTCAAGACGAAATTGCATCGACTTCCAAAGAAATTGCCTTGT
TGCAGCAATATTCTGAATTTGTGGGTGATTATCTGCACCTGTTGCGTCAGGGCAAAACTGAACAACTGGATGCGATTTCT
GCAACTTTTGATGCAGCCTGGAATGACTACGGCTTTATCACTACCGAAGATCATGATGCGGTGCAGTCGCAAGGTTTGGT
ATCCCGTCTGGTTGAACTGAATATCGACCAGTTGCTGGATGCCGAGTTTGAATTTGACCGCCGTGCCGTTGAAGAATATC
CAGCTTATATTGAAGCCTTAAGCCAGCAGGCAGCTGAACTGGTGGCGCATACGGATAACCGTGCAGCTGTGGGTATTCAT
GAATTCGCCTCACAGTTAAAAGCGGCTTATGATGCACTGATTCATCGACCAGTGTTGCTGCAAAGCGATTATGCCTTTGA
GCTGTTCGCACAGGCGCATCAGGAATTTATCCACCTGTTCGATACCCTGGCTGCAGGTCAACGCGTGATTCTCAGCGCAG
AAGTTGAAAAACTGTTGGCGGATCTGTCTGCCTTTGTACAGCAAGAGATTGAAGAATTCGAGCCAGAAGCAGCGCCTGAA
ACAGTGGTAGAAGCACCTGAGGCTGCTCCTGTAGCTACAGGTAGTGTTGACTTTGCTGCCATCAGTCAATGTATGGATCT
GGACCGTCAACAGAGCGAATATGATGCTTCCAATCGTGACTTCGATGCAGATCTGCTGGATATCTTCCTGGAAGAAGCCG
ATGAGCTGCTAGCAGGAATTGACGAAGACCTGAATACCTGGGCACGTGAACCAGAAAATACTGAATCACTCAATAACCTG
ATGCGTTATCTGCACACCCTCAAAGGTGGTGCAAACATGATTGCAGCAACCAATATCGGTTCGATTGCGCATGAACTGGA
AAGCATCTATGAACGCGTGATTCGTCAGCAGATTGCGGTATCACCAGCACTGATCCAGATTGTGCGACTGGTACAGGATA
GTGTTTCTGACCGTATCCAGACCATCCGTGATGAACTGATTGATTATCCAGCGACAGAAACCATTAATATCCTGCAAAAC
ATCCAGGCACTGGCTGCGGGTACAGCAACAGCGACTACAGCAGTCGATACTGCAGTGGTTGAACCTGTGGTTGCTGTGGA
AGCAGAATCGGAAGAAGATAGTGAAGAGATTGCTGTTGAAGCTGAAAGCACTGAGTCTGTAGCAGAAATTTCTGAACCGG
AAATTCTGTTAGATCCGGTTGAAGAAACAGTTGTTGAAGAAGTAGCTGCAGCATCAGTTGAACCTGTTTCAGAAGAAGAC
GAACTGAAAGCGATTGTTGCAGAGACGTTCCGCGAAGAATCTGAAGAGATTCTAGGAAATGCTGAGAAGCTGCTGGAACA
ATGGTTCGACCAGCGTAGTGACCGTAGCTTGCTGCTCCAATTACAACGTGCGGCCCACAGTATTAAAGGTGGGGCGCGTA
TGGCAGGCGACGAAACCATCGCAACTATTGCCTATGGTTTGGAAACCACTTTCGAACAGTTCGCGGTTCATCATTTCAAC
TCCAATGCCTACGACAGCCTGTTACAGCAGACCTGGAAATGGCTGGCTCAGGCAATCTTCAAGCATGATTACAGTGGTTT
TGAACAGATCAAGACTGCGTTAGATGCAATTGAGTTTGTCGATGTCACTGCACAGTTGCCGGAACGTCTGACCAAAACTG
AAAGTCTTGATATTACTACTGGCTTTGAATTTGTTCAGGGTGATGGTACTGAACCACCTAATATGATGGGTGAGTGGGCA
GAAACAGCGGCTTCTGACAACAGCAACGAAATGATCCGTATCTCGGCTGATCTGGTTGAGAAGATGATCAATCTGTCGGG
TGAGAATTCGATTAACCGTTCGCGTATCGAGATGGATCTGGGGCAGCTCGGCAATACCCTGAACGAGATGGAACTGGCGA
TCAAGCGTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAACCCAGATTATTGCCAAGCACGGTGCTGAAAAC
TCGCGCTATACCGACTTCGACCCATTGGAGATGGACCAGTATTCCTCTCTGAACCAGCTGTCGAAATCGCTGGCTGAATC
TGCATCGGATTTAATCGACTTCAAGTCAACGCTGGCGGAAAAAATCCGTGATACCGAAGGCCTGTTACTGCAACAGTCAC
GTATTCAAGCTGAAATTCAGGAAAGCTTGATGCGTACCCGTCTGGTACCATTCGACCGTATGTTGCCTCGTCTGCAACGT
ATCGTTCGTCAGACTTCGACCACCTTGAACCGTCCGGCCGAACTGATTGTTCAGAATACAGAAGGTGAACTGGATCGTAA
TATTCTGGAACGTCTGGTCAGTCCGTTTGAGCACATGCTGCGTAACGCGATCGACCATGGTCTGGAAGATACCGCAGAGC
GTATTGCGCTGAACAAGCCGGAAGTGGGTTCGATTGTACTGAACATCAGCCGTCAGGGTACTGATGTACTCATCTCCTTT
AGTGATGATGGTAAAGGGATTGACTCAGAAGCGATCCGTGCCAAAGCCATTGCGAAAGGCTTGCTGAAAGAAGAGCAGCA
GGTGGATCAGGAAGAGCTGTTGCAGTTCATCTTCCATCCAGGCTTCAGTACTGCGAAAGAGGTCACCCAGATTTCTGGTC
GTGGTGTGGGACTGGACGTGGTACAAAGCGAGATCAAGGCGCTCGGTGGTCATGTTTCAGTGAAATCTGAACTGGGTAAA
GGCACGACCTTTACCATTCGCGTACCGACTACAGTAGCAGTCAGCGATGCCCTGATGGTGAAAGCTGGCGATCAGCAGTA
TGCAATTTCTCTGGCACAGATCGACCGTATCGTGCGTATTGCACCAACCACTCTGGAAACTTACTTCAACAGTAAAGATG
ACTACTTCAAGATTGATGGCGTGAACTACAAACTGCGTTATCTGTCTGAGTTTGTTGCCAATCAGCCAGTGCCACGTCTG
AATAACATCGCGAACTCACTGCCAGTGTTGCTGATCAAAGGCAACAATGGTCAGAGTATTGCCTTGCTGGTAGACCAGTT
AGTCGGTTCACGTGCACAGATTGTGGTGAAACCAATTGGCCAGCAGTTTGCCAATATTGGGGTAGTTGCCGGTGCAACAA
TTCTCGGCGATGGTAGTGTCTGCCTGATTCTCGACGGTCAGAATGTTGCCCGTCAGGCACAGGCAACACAACGCATCAAA
CAGGTATCCGATCAGCAGGATCTGTCACGTCGTGGTAATGCCCGCCGTCTGGTGATGATCGTCGATGACTCCGTAACCGT
GCGTAAGGTTACTTCGCGTCTGCTCGAACGTCAGGGTTACGATGTGGTAACCGCCAAAGATGGTGTGGATGCAATTGAGC
AGCTGGAAAATGTTCGTCCGGATCTGATGCTGCTGGATATCGAGATGCCACGCATGGATGGTTTCGAAGTGACCAATCTG
GTACGCCACCACGATATTCACCGCAACTTGCCAATTATCATGATTACATCACGTACTGGCGAGAAGCATCGTGAACGTGC
CTTCAGCTTGGGCGTCACCCATTATATGGGTAAACCGTTCCAGGAAGCTGAACTGCTTGCCAATATTCAAGAACTAATCG
CTGCTCAACAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.861

100

0.623


Multiple sequence alignment