Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NJ284_RS06285 Genome accession   NZ_CP156748
Coordinates   1424929..1425330 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas citri pv. anacardii strain CCRMTAQ13     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1419929..1430330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NJ284_RS06265 (NJ284_06265) tsaB 1420946..1421671 (+) 726 WP_007973968.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  NJ284_RS06270 (NJ284_06270) - 1421668..1422582 (+) 915 WP_007973966.1 ADP-ribosylglycohydrolase family protein -
  NJ284_RS06275 (NJ284_06275) - 1422870..1423745 (-) 876 WP_007973963.1 energy transducer TonB -
  NJ284_RS06280 (NJ284_06280) gshB 1423742..1424692 (-) 951 WP_007967149.1 glutathione synthase -
  NJ284_RS06285 (NJ284_06285) pilG 1424929..1425330 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  NJ284_RS06290 (NJ284_06290) - 1425348..1425710 (+) 363 WP_005913708.1 response regulator -
  NJ284_RS06295 (NJ284_06295) - 1425710..1426240 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  NJ284_RS06300 (NJ284_06300) - 1426280..1428316 (+) 2037 WP_103100880.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=1002493 NJ284_RS06285 WP_005913706.1 1424929..1425330(+) (pilG) [Xanthomonas citri pv. anacardii strain CCRMTAQ13]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1002493 NJ284_RS06285 WP_005913706.1 1424929..1425330(+) (pilG) [Xanthomonas citri pv. anacardii strain CCRMTAQ13]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTTGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment