Detailed information NTG1002443

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CV024_RS02235
• Genome accession: NZ_CP156745
• Coordinates: 473425..474432 (+)
• Length: 335 a.a.
• NCBI ID: WP_020429332.1
• Uniprot ID: A0AAX2LJL2
• Organism: Vibrio fluvialis strain QY27
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 468425..479432

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CV024_RS02215 (CV024_02215)	metJ	468572..468889 (+)	318	WP_020329393.1	met regulon transcriptional regulator MetJ	-
CV024_RS02220 (CV024_02220)	-	468966..470243 (-)	1278	WP_100267583.1	malic enzyme-like NAD(P)-binding protein	-
CV024_RS02225 (CV024_02225)	rpmE	470455..470673 (-)	219	WP_020329395.1	50S ribosomal protein L31	-
CV024_RS02230 (CV024_02230)	priA	470919..473120 (+)	2202	WP_100267584.1	primosomal protein N'	-
CV024_RS02235 (CV024_02235)	cytR	473425..474432 (+)	1008	WP_020429332.1	DNA-binding transcriptional regulator CytR	Regulator
CV024_RS02240 (CV024_02240)	ftsN	474562..475119 (+)	558	WP_100267585.1	cell division protein FtsN	-
CV024_RS02245 (CV024_02245)	hslV	475255..475809 (+)	555	WP_020329399.1	ATP-dependent protease subunit HslV	-
CV024_RS02250 (CV024_02250)	hslU	475851..477182 (+)	1332	WP_020329400.1	HslU--HslV peptidase ATPase subunit	-
CV024_RS02255 (CV024_02255)	-	477271..478188 (+)	918	WP_020329401.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CV024_RS02260 (CV024_02260)	rraA	478264..478791 (+)	528	WP_020329402.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36914.45 Da
• Isoelectric Point: 6.3516

>NTDB_id=1002443 CV024_RS02235 WP_020429332.1 473425..474432(+) (cytR) [Vibrio fluvialis strain QY27]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRVAQIAGPEAAVLCQFRQQGYQQALRRAGITRNPTYSMSGDFTFESGAKAVRQLLALPEPPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRSM

Nucleotide

• Length: 1008 bp

>NTDB_id=1002443 CV024_RS02235 WP_020429332.1 473425..474432(+) (cytR) [Vibrio fluvialis strain QY27]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTTTCGACGGCGACGGTCTCGCGCGCTCTGATGAATCCCGAAAA
AGTTTCAGCCTCAACCCGTAAGCGGGTCGAGGAAGCAGTTTTAGAAGCTGGCTATTCACCGAATTCTTTGGCCCGAAATC
TGCGCCGCAATGAGTCAAAAACCATTGTCGCGATAGTGCCGGACATCTGTGACCCTTATTACACAGAGATCATTCGTGGT
ATCGAAGATGCTGCAATGGAACACGGTTATCTGGTGCTGCTGGGCGACAGCGGACAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACCTGGTGTTTACCAAACAAGCGGACGGCATGTTACTGCTGGGGACTGACTTGCCGTTTGATGTGAGCAAACCTG
AGCAGAAAAACCTGCCACCGATGGTGATGGCGTGTGAGTTTGCGCCGGAGCTTGAGCTACCTACGGTACACATTGATAAC
CTGACATCGGCGTTTGAAGCCGTGAACTATCTGACTCAGATGGGGCACAAACGTGTGGCACAAATCGCCGGACCGGAAGC
CGCGGTGCTGTGTCAGTTCCGTCAGCAAGGTTATCAGCAGGCGCTGCGTCGTGCGGGTATCACTCGCAATCCGACCTACA
GTATGAGTGGTGACTTTACTTTTGAGTCCGGAGCCAAAGCGGTGCGTCAATTATTGGCCCTGCCTGAGCCACCAACGGCT
ATCTTCTGTCACAACGATACCATGGCGATTGGCGCGATTCAGGAAGCGAAACGTCTGGGACTGCGCGTACCGCAGGATCT
CTCTGTGGTGGGCTTTGATGACATTCAATTCGCCCAGTACTGCGATCCACCGCTGACGACCATCTCTCAGCCTCGCTACG
AGATTGGCCGTCAGGCGATGCTGATGATGCTGGAATTGCTGCGTGGTCATGACGTGCGTGCCGGCTCACGTTTGCTGGAA
ACTCAGCTGGTGGTGCGTGAGAGCGCAGCGCCGCCTCGTTCGATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	94.277	99.104	0.934
cytR	Vibrio parahaemolyticus RIMD 2210633	90.691	99.403	0.901