Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   QQE12_RS10995 Genome accession   NZ_CP156695
Coordinates   2185159..2185875 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain SA-684     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2180159..2190875
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QQE12_RS10965 (QQE12_010965) - 2180372..2180998 (+) 627 WP_000522388.1 nitroreductase family protein -
  QQE12_RS10970 (QQE12_010970) - 2181359..2182144 (+) 786 WP_000867948.1 carbon-nitrogen family hydrolase -
  QQE12_RS10975 (QQE12_010975) - 2182746..2182880 (-) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -
  QQE12_RS10980 (QQE12_010980) - 2183116..2183679 (+) 564 WP_285238859.1 accessory gene regulator AgrB -
  QQE12_RS10985 (QQE12_010985) - 2183683..2183823 (+) 141 WP_000735197.1 cyclic lactone autoinducer peptide -
  QQE12_RS10990 (QQE12_010990) - 2183848..2185140 (+) 1293 WP_000387809.1 GHKL domain-containing protein -
  QQE12_RS10995 (QQE12_010995) agrA 2185159..2185875 (+) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  QQE12_RS11000 (QQE12_011000) - 2186249..2187208 (-) 960 WP_001253292.1 carbohydrate kinase -
  QQE12_RS11005 (QQE12_011005) - 2187205..2188689 (-) 1485 WP_001791588.1 sucrose-6-phosphate hydrolase -
  QQE12_RS11010 (QQE12_011010) - 2188838..2189788 (-) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=1002265 QQE12_RS10995 WP_000688492.1 2185159..2185875(+) (agrA) [Staphylococcus aureus strain SA-684]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=1002265 QQE12_RS10995 WP_000688492.1 2185159..2185875(+) (agrA) [Staphylococcus aureus strain SA-684]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATCAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGTCATAATATCGAATCTATTG
ATTCGAAAGAGCGTATTGTTTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment