Detailed information NTG1002197

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ABFY44_RS16770
• Genome accession: NZ_CP156684
• Coordinates: 3395137..3396300 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain D83
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3390137..3401300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFY44_RS16740 (ABFY44_16740)	-	3390401..3390820 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
ABFY44_RS16745 (ABFY44_16745)	comFC	3390894..3391583 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
ABFY44_RS16750 (ABFY44_16750)	-	3391589..3391873 (-)	285	WP_003151389.1	competence protein ComFB	-
ABFY44_RS16755 (ABFY44_16755)	comFA	3391931..3393316 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
ABFY44_RS16760 (ABFY44_16760)	-	3393425..3394273 (-)	849	WP_032876160.1	DegV family protein	-
ABFY44_RS16765 (ABFY44_16765)	degU	3394371..3395060 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ABFY44_RS16770 (ABFY44_16770)	degS	3395137..3396300 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
ABFY44_RS16775 (ABFY44_16775)	-	3396523..3397170 (+)	648	WP_007614107.1	YigZ family protein	-
ABFY44_RS16780 (ABFY44_16780)	-	3397175..3398356 (+)	1182	WP_032876157.1	LCP family protein	-
ABFY44_RS16785 (ABFY44_16785)	-	3398455..3399531 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
ABFY44_RS16790 (ABFY44_16790)	-	3399664..3400860 (-)	1197	WP_032876154.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1002197 ABFY44_RS16770 WP_007407484.1 3395137..3396300(-) (degS) [Bacillus velezensis strain D83]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1002197 ABFY44_RS16770 WP_007407484.1 3395137..3396300(-) (degS) [Bacillus velezensis strain D83]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951