Detailed information NTG1002084

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: ABFY42_RS07310
• Genome accession: NZ_CP156682
• Coordinates: 1403911..1404195 (+)
• Length: 94 a.a.
• NCBI ID: WP_014417633.1
• Uniprot ID: I2C4H1
• Organism: Bacillus velezensis strain B115
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1398911..1409195

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFY42_RS07290 (ABFY42_07290)	-	1400155..1401063 (+)	909	WP_022553408.1	ketopantoate reductase family protein	-
ABFY42_RS07295 (ABFY42_07295)	-	1401094..1402326 (-)	1233	WP_007409644.1	aminopeptidase	-
ABFY42_RS07300 (ABFY42_07300)	-	1402427..1402561 (-)	135	WP_003154559.1	protein YkpC	-
ABFY42_RS07305 (ABFY42_07305)	mreBH	1402633..1403640 (-)	1008	WP_014417632.1	cell shape-determining protein MreBH	-
ABFY42_RS07310 (ABFY42_07310)	abrB	1403911..1404195 (+)	285	WP_014417633.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
ABFY42_RS07315 (ABFY42_07315)	-	1404368..1405672 (+)	1305	WP_014417634.1	ATP-binding protein	-
ABFY42_RS07320 (ABFY42_07320)	-	1405674..1406501 (+)	828	WP_014417635.1	gamma-glutamylcyclotransferase family protein	-
ABFY42_RS07325 (ABFY42_07325)	ktrC	1406542..1407207 (+)	666	WP_003154554.1	Ktr system potassium transporter KtrC	-
ABFY42_RS07330 (ABFY42_07330)	ade	1407356..1409089 (+)	1734	WP_022553404.1	adenine deaminase	-

Sequence

Protein

• Length: 94 a.a.
• Molecular weight: 10516.38 Da
• Isoelectric Point: 5.8979

>NTDB_id=1002084 ABFY42_RS07310 WP_014417633.1 1403911..1404195(+) (abrB) [Bacillus velezensis strain B115]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIVLKKYKPHGICLMTGEITSENQEYGNGKIILSPEGAK
MLLEEIEEALKGRS

Nucleotide

• Length: 285 bp

>NTDB_id=1002084 ABFY42_RS07310 WP_014417633.1 1403911..1404195(+) (abrB) [Bacillus velezensis strain B115]
ATGAAATCAATTGGTGTAGTAAGAAAAGTAGACGAACTCGGGCGTATTGTCATGCCGATTGAATTGAGAAGAGCATTGGA
TATCGCTATTAAAGATAGTATTGAATTTTTCGTTGACGGAGACAAAATTGTCTTAAAAAAATACAAGCCGCACGGCATTT
GCTTAATGACGGGGGAAATTACCTCCGAAAATCAGGAGTACGGCAACGGCAAAATTATTTTAAGTCCTGAAGGAGCGAAA
ATGCTGCTTGAGGAAATCGAGGAAGCGTTAAAAGGTAGATCATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (54-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: I2C4H1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	55.435	97.872	0.543