Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABFY42_RS05705 Genome accession   NZ_CP156682
Coordinates   1113997..1114188 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain B115     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1108997..1119188
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFY42_RS05675 (ABFY42_05675) argF 1109848..1110819 (+) 972 WP_022553565.1 ornithine carbamoyltransferase -
  ABFY42_RS05680 (ABFY42_05680) - 1110895..1111074 (+) 180 WP_003155070.1 YjzC family protein -
  ABFY42_RS05685 (ABFY42_05685) - 1111111..1111296 (-) 186 WP_007409129.1 YjzD family protein -
  ABFY42_RS05690 (ABFY42_05690) - 1111557..1112291 (+) 735 WP_022553564.1 hypothetical protein -
  ABFY42_RS05695 (ABFY42_05695) - 1112374..1112940 (+) 567 WP_032863798.1 hypothetical protein -
  ABFY42_RS05700 (ABFY42_05700) med 1113031..1113984 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  ABFY42_RS05705 (ABFY42_05705) comZ 1113997..1114188 (+) 192 WP_003155061.1 ComZ family protein Regulator
  ABFY42_RS05710 (ABFY42_05710) - 1114217..1114435 (-) 219 WP_007409123.1 hypothetical protein -
  ABFY42_RS05715 (ABFY42_05715) - 1114602..1115540 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ABFY42_RS05720 (ABFY42_05720) fabF 1115563..1116801 (+) 1239 WP_022553563.1 beta-ketoacyl-ACP synthase II -
  ABFY42_RS05725 (ABFY42_05725) - 1116884..1117669 (+) 786 WP_022553562.1 DUF2268 domain-containing protein -
  ABFY42_RS05730 (ABFY42_05730) - 1117843..1118829 (+) 987 WP_022553561.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=1002075 ABFY42_RS05705 WP_003155061.1 1113997..1114188(+) (comZ) [Bacillus velezensis strain B115]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1002075 ABFY42_RS05705 WP_003155061.1 1113997..1114188(+) (comZ) [Bacillus velezensis strain B115]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCATATGAGCTTG
GCAGATCTGATGCCGGAGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment