Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ABFY42_RS01795 Genome accession   NZ_CP156682
Coordinates   347731..347895 (+) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus velezensis strain B115     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 342731..352895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFY42_RS01790 (ABFY42_01790) srfAB 344622..347714 (+) 3093 Protein_312 surfactin non-ribosomal peptide synthetase SrfAB -
  ABFY42_RS01795 (ABFY42_01795) comS 347731..347895 (+) 165 WP_269194677.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=1002061 ABFY42_RS01795 WP_269194677.1 347731..347895(+) (comS) [Bacillus velezensis strain B115]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=1002061 ABFY42_RS01795 WP_269194677.1 347731..347895(+) (comS) [Bacillus velezensis strain B115]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGGAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment