Detailed information
Bioinformatically predicted
Overview
| Name | rpoS | Type | Regulator |
| Locus tag | EL176_RS06765 | Genome accession | NZ_LR134332 |
| Coordinates | 1458002..1459027 (+) | Length | 341 a.a. |
| NCBI ID | WP_015444568.1 | Uniprot ID | Q9S4T1 |
| Organism | Legionella pneumophila strain NCTC11193 | ||
| Function | regulation of chitinases (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1453002..1464027
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL176_RS06735 (NCTC11193_01335) | - | 1453436..1453753 (+) | 318 | WP_010947009.1 | DUF2845 domain-containing protein | - |
| EL176_RS06740 (NCTC11193_01336) | - | 1453790..1454161 (+) | 372 | WP_010947010.1 | protease inhibitor I42 family protein | - |
| EL176_RS06745 (NCTC11193_01337) | - | 1454209..1455933 (-) | 1725 | WP_010947011.1 | NAD-dependent malic enzyme | - |
| EL176_RS06750 (NCTC11193_01338) | - | 1456013..1456396 (+) | 384 | WP_010947012.1 | hypothetical protein | - |
| EL176_RS06755 (NCTC11193_01339) | surE | 1456399..1457154 (+) | 756 | WP_010947013.1 | 5'/3'-nucleotidase SurE | - |
| EL176_RS06760 (NCTC11193_01340) | - | 1457173..1457916 (+) | 744 | WP_010947014.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| EL176_RS06765 (NCTC11193_01341) | rpoS | 1458002..1459027 (+) | 1026 | WP_015444568.1 | RNA polymerase sigma factor RpoS | Regulator |
| EL176_RS06770 (NCTC11193_01342) | hmgA | 1459130..1460380 (-) | 1251 | WP_010947016.1 | homogentisate 1,2-dioxygenase | - |
| EL176_RS06775 (NCTC11193_01343) | - | 1460526..1461269 (+) | 744 | WP_010947017.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| EL176_RS06780 (NCTC11193_01344) | ruvC | 1461269..1461793 (+) | 525 | WP_010947018.1 | crossover junction endodeoxyribonuclease RuvC | - |
| EL176_RS06785 (NCTC11193_01345) | ruvA | 1461790..1462389 (+) | 600 | WP_010947019.1 | Holliday junction branch migration protein RuvA | - |
| EL176_RS06790 (NCTC11193_01346) | - | 1462439..1462759 (+) | 321 | WP_010947020.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 39449.70 Da Isoelectric Point: 4.3732
>NTDB_id=1001901 EL176_RS06765 WP_015444568.1 1458002..1459027(+) (rpoS) [Legionella pneumophila strain NCTC11193]
MQDDEEPIKDKEFKEEEWSEPDDESLLSEEDVEPDIEKMEEELDELPEFTDDETFPSFQRGKNIAKALDATQLYLGEIGF
SPLLTAEEEIHYATLALKGDMEARKKMIESNLRLVVKIARRYLNRGLPLLDLIEEGNLGLMKSVEKFDPKRGFRFSTYAT
WWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARQLTQKLDHEPSPEEIAEMVDKPLEDVQKLLGLNDKVASVDTPIG
FDETKSLLDTIADENSLNPAELLTNENLRQHIESLLDKLTENQQQVIARRFGLRGFEKATLEDVGKEIDLTRERVRQIQV
EALKTLRTLLERVGLTQEDLF
MQDDEEPIKDKEFKEEEWSEPDDESLLSEEDVEPDIEKMEEELDELPEFTDDETFPSFQRGKNIAKALDATQLYLGEIGF
SPLLTAEEEIHYATLALKGDMEARKKMIESNLRLVVKIARRYLNRGLPLLDLIEEGNLGLMKSVEKFDPKRGFRFSTYAT
WWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARQLTQKLDHEPSPEEIAEMVDKPLEDVQKLLGLNDKVASVDTPIG
FDETKSLLDTIADENSLNPAELLTNENLRQHIESLLDKLTENQQQVIARRFGLRGFEKATLEDVGKEIDLTRERVRQIQV
EALKTLRTLLERVGLTQEDLF
Nucleotide
Download Length: 1026 bp
>NTDB_id=1001901 EL176_RS06765 WP_015444568.1 1458002..1459027(+) (rpoS) [Legionella pneumophila strain NCTC11193]
ATGCAAGATGATGAAGAGCCAATTAAGGACAAGGAATTTAAAGAAGAGGAATGGTCTGAGCCAGATGATGAATCTCTGTT
GTCAGAAGAAGATGTTGAACCTGATATCGAAAAAATGGAAGAAGAGCTTGATGAACTTCCAGAGTTTACTGATGATGAAA
CTTTTCCTTCATTCCAGCGCGGGAAAAATATTGCCAAGGCTTTAGATGCGACTCAACTTTACTTGGGTGAAATTGGTTTT
TCTCCTTTGTTAACGGCTGAAGAAGAAATCCATTATGCGACTCTTGCTTTAAAAGGTGATATGGAAGCACGCAAGAAAAT
GATTGAGTCGAATTTGCGCCTGGTGGTTAAAATAGCCAGACGTTATCTTAATAGAGGATTGCCTCTTCTTGATCTAATCG
AAGAGGGTAACCTGGGTTTAATGAAGTCTGTTGAGAAATTTGACCCCAAGCGAGGATTCCGTTTTTCAACTTATGCGACC
TGGTGGATTAGGCAAACTATTGAGCGCGCAATTATGAATCAAACGAGAACTATCCGTTTGCCTATTCATGTCGTGAAAGA
ACTTAATGTTTATCTCAGAGCGGCAAGGCAATTGACGCAAAAACTGGATCATGAACCATCACCTGAAGAAATAGCAGAAA
TGGTGGATAAGCCTTTGGAGGATGTCCAAAAATTATTGGGATTGAATGATAAAGTCGCTTCAGTTGATACTCCAATTGGA
TTTGATGAAACCAAATCTTTATTAGATACAATTGCTGATGAAAACAGTTTAAATCCTGCAGAGCTGCTAACCAATGAGAA
TTTAAGGCAGCATATAGAATCTCTTCTGGATAAATTAACTGAGAATCAACAGCAGGTTATCGCAAGACGTTTTGGGTTAA
GAGGTTTTGAAAAAGCGACACTGGAAGACGTTGGTAAGGAAATTGATTTGACCCGAGAACGCGTTCGCCAAATTCAAGTT
GAAGCGTTGAAGACACTTAGAACTTTGTTAGAGCGGGTTGGACTAACACAAGAGGATTTGTTTTGA
ATGCAAGATGATGAAGAGCCAATTAAGGACAAGGAATTTAAAGAAGAGGAATGGTCTGAGCCAGATGATGAATCTCTGTT
GTCAGAAGAAGATGTTGAACCTGATATCGAAAAAATGGAAGAAGAGCTTGATGAACTTCCAGAGTTTACTGATGATGAAA
CTTTTCCTTCATTCCAGCGCGGGAAAAATATTGCCAAGGCTTTAGATGCGACTCAACTTTACTTGGGTGAAATTGGTTTT
TCTCCTTTGTTAACGGCTGAAGAAGAAATCCATTATGCGACTCTTGCTTTAAAAGGTGATATGGAAGCACGCAAGAAAAT
GATTGAGTCGAATTTGCGCCTGGTGGTTAAAATAGCCAGACGTTATCTTAATAGAGGATTGCCTCTTCTTGATCTAATCG
AAGAGGGTAACCTGGGTTTAATGAAGTCTGTTGAGAAATTTGACCCCAAGCGAGGATTCCGTTTTTCAACTTATGCGACC
TGGTGGATTAGGCAAACTATTGAGCGCGCAATTATGAATCAAACGAGAACTATCCGTTTGCCTATTCATGTCGTGAAAGA
ACTTAATGTTTATCTCAGAGCGGCAAGGCAATTGACGCAAAAACTGGATCATGAACCATCACCTGAAGAAATAGCAGAAA
TGGTGGATAAGCCTTTGGAGGATGTCCAAAAATTATTGGGATTGAATGATAAAGTCGCTTCAGTTGATACTCCAATTGGA
TTTGATGAAACCAAATCTTTATTAGATACAATTGCTGATGAAAACAGTTTAAATCCTGCAGAGCTGCTAACCAATGAGAA
TTTAAGGCAGCATATAGAATCTCTTCTGGATAAATTAACTGAGAATCAACAGCAGGTTATCGCAAGACGTTTTGGGTTAA
GAGGTTTTGAAAAAGCGACACTGGAAGACGTTGGTAAGGAAATTGATTTGACCCGAGAACGCGTTCGCCAAATTCAAGTT
GAAGCGTTGAAGACACTTAGAACTTTGTTAGAGCGGGTTGGACTAACACAAGAGGATTTGTTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rpoS | Vibrio cholerae O1 biovar El Tor strain E7946 |
67.509 |
81.232 |
0.548 |