Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABFV80_RS14260 Genome accession   NZ_CP156659
Coordinates   3183181..3183567 (+) Length   128 a.a.
NCBI ID   WP_095540012.1    Uniprot ID   A0A2A2AW64
Organism   Vandammella animalimorsus strain SK20231019-0001     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3178181..3188567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFV80_RS14245 (ABFV80_002849) yihA 3180124..3180828 (+) 705 WP_347484979.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
  ABFV80_RS14250 (ABFV80_002850) - 3181012..3181953 (+) 942 WP_347484980.1 hypothetical protein -
  ABFV80_RS14255 (ABFV80_002851) - 3182074..3182616 (-) 543 Protein_2796 polymer-forming cytoskeletal protein -
  ABFV80_RS14260 (ABFV80_002852) pilG 3183181..3183567 (+) 387 WP_095540012.1 response regulator Regulator
  ABFV80_RS14265 (ABFV80_002853) - 3183603..3183980 (+) 378 WP_095542118.1 response regulator -
  ABFV80_RS14270 (ABFV80_002854) - 3183977..3184525 (+) 549 WP_095551875.1 chemotaxis protein CheW -
  ABFV80_RS14275 (ABFV80_002855) - 3184583..3186796 (+) 2214 WP_347484983.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14257.37 Da        Isoelectric Point: 5.2027

>NTDB_id=1001896 ABFV80_RS14260 WP_095540012.1 3183181..3183567(+) (pilG) [Vandammella animalimorsus strain SK20231019-0001]
MSDQASVTKVLVVDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALAKVNDYEPDLIFCDIMMPKLDGYQTCAIIKRNPKFT
ATPVIMLSSKDGFFDKARGRMVGSEDYLTKPFTKDQLLKAVRDFSAAN

Nucleotide


Download         Length: 387 bp        

>NTDB_id=1001896 ABFV80_RS14260 WP_095540012.1 3183181..3183567(+) (pilG) [Vandammella animalimorsus strain SK20231019-0001]
ATGAGCGATCAAGCAAGTGTGACCAAAGTGCTGGTGGTCGATGACAGCAACACGATTCGACGCAGCGCCGAGATTTTTCT
CAAGCAGGGCGGCCATGAAGTGCTGTTGGCCGAAGATGGCTTTGATGCGCTCGCAAAGGTCAACGATTACGAGCCGGATC
TGATTTTCTGCGACATCATGATGCCCAAGCTCGACGGCTACCAAACATGCGCCATCATCAAGCGCAACCCCAAATTCACG
GCCACGCCCGTCATCATGCTCTCTTCCAAGGACGGCTTTTTCGACAAGGCGCGCGGGCGCATGGTAGGCAGTGAGGACTA
TCTGACCAAGCCATTCACGAAGGACCAGTTGCTCAAGGCAGTGCGAGATTTCAGCGCCGCAAATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A2AW64

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

57.48

99.219

0.57

Multiple sequence alignment