Detailed information NTG1001822

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: EL342_RS08825
• Genome accession: NZ_LR134330
• Coordinates: 1872228..1873253 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain NCTC13715
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1867228..1878253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL342_RS08800 (NCTC13715_01714)	-	1867418..1867735 (-)	318	WP_003097288.1	tetratricopeptide repeat protein	-
EL342_RS08805 (NCTC13715_01715)	trkA	1867883..1869256 (-)	1374	WP_003111375.1	Trk system potassium transporter TrkA	-
EL342_RS08810 (NCTC13715_01716)	rsmB	1869283..1870587 (-)	1305	WP_023092224.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
EL342_RS08815 (NCTC13715_01717)	fmt	1870584..1871528 (-)	945	WP_031756537.1	methionyl-tRNA formyltransferase	-
EL342_RS08820 (NCTC13715_01718)	def	1871583..1872089 (-)	507	WP_003107059.1	peptide deformylase	-
EL342_RS08825 (NCTC13715_01719)	tsaP	1872228..1873253 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
EL342_RS08830 (NCTC13715_01720)	dprA	1873388..1874476 (+)	1089	WP_033989019.1	DNA-processing protein DprA	Machinery gene
EL342_RS08835 (NCTC13715_01721)	-	1874517..1875074 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
EL342_RS08840 (NCTC13715_01722)	-	1875084..1876061 (-)	978	WP_033938270.1	NADPH:quinone reductase	-
EL342_RS08845 (NCTC13715_01723)	hemF	1876252..1877169 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
EL342_RS08850 (NCTC13715_01724)	aroE	1877227..1878051 (+)	825	WP_003097314.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=1001822 EL342_RS08825 WP_003097294.1 1872228..1873253(+) (tsaP) [Pseudomonas aeruginosa strain NCTC13715]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=1001822 EL342_RS08825 WP_003097294.1 1872228..1873253(+) (tsaP) [Pseudomonas aeruginosa strain NCTC13715]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAATGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393