Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BAMY6639_RS10615 Genome accession   NZ_CP006058
Coordinates   2172928..2173779 (-) Length   283 a.a.
NCBI ID   WP_004392966.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens UMAF6639     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2167928..2178779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAMY6639_RS10590 (BAMY6639_11195) - 2168095..2170098 (-) 2004 WP_060673742.1 molybdopterin-dependent oxidoreductase -
  BAMY6639_RS10595 (BAMY6639_11200) - 2170145..2170351 (-) 207 WP_004392973.1 DUF951 domain-containing protein -
  BAMY6639_RS10600 (BAMY6639_11205) - 2170437..2171462 (-) 1026 WP_088005468.1 hypothetical protein -
  BAMY6639_RS10605 (BAMY6639_11210) - 2171606..2172109 (+) 504 WP_033574260.1 GNAT family N-acetyltransferase -
  BAMY6639_RS10610 (BAMY6639_11215) yyaC 2172284..2172898 (+) 615 WP_004392969.1 spore protease YyaC -
  BAMY6639_RS10615 (BAMY6639_11220) spo0J 2172928..2173779 (-) 852 WP_004392966.1 ParB/RepB/Spo0J family partition protein Regulator
  BAMY6639_RS10620 (BAMY6639_11225) soj 2173772..2174533 (-) 762 WP_007409899.1 sporulation initiation inhibitor protein Soj -
  BAMY6639_RS10625 (BAMY6639_11230) noc 2174832..2175683 (-) 852 WP_007409900.1 nucleoid occlusion protein -
  BAMY6639_RS10630 (BAMY6639_11235) rsmG 2175805..2176524 (-) 720 WP_007409901.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  BAMY6639_RS10635 (BAMY6639_11240) mnmG 2176538..2178424 (-) 1887 WP_061861078.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -

Sequence

Protein


Download         Length: 283 a.a.        Molecular weight: 32351.29 Da        Isoelectric Point: 8.3471

>NTDB_id=100175 BAMY6639_RS10615 WP_004392966.1 2172928..2173779(-) (spo0J) [Bacillus amyloliquefaciens UMAF6639]
MAKGGLGKGINALFNQVDLSEETVEEIKISDLRPNPYQPRKQFDDESLAELKESIIQHGILQPIIVRKSLKGYDIVAGER
RYRAAKLAGKETVPAIVRDLSESLMREIALLENLQREDLSPLEEALAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLL
TLPESIQNLIAEGTLSMGHGRTLLGLKNKNKLEPLVKKVVEEQLNVRQLEQLIQQLNNNVPRETKKKEPVQDVVLKERES
YLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLERILELLSEREA

Nucleotide


Download         Length: 852 bp        

>NTDB_id=100175 BAMY6639_RS10615 WP_004392966.1 2172928..2173779(-) (spo0J) [Bacillus amyloliquefaciens UMAF6639]
ATGGCTAAAGGCGGGCTCGGAAAAGGGATTAACGCGTTGTTTAATCAGGTTGATTTGTCTGAAGAGACAGTGGAAGAGAT
TAAAATCAGTGATTTACGCCCCAATCCTTATCAGCCAAGAAAACAATTTGACGATGAGTCATTAGCTGAACTGAAGGAAT
CCATCATTCAGCATGGCATTCTTCAGCCCATTATCGTGAGAAAATCATTGAAGGGCTACGATATTGTAGCCGGCGAACGC
CGTTACCGCGCCGCAAAACTTGCCGGTAAAGAGACAGTGCCGGCCATCGTGCGGGATTTATCTGAATCGCTGATGCGGGA
AATCGCTCTTTTGGAAAACCTTCAGCGTGAAGACTTATCACCGCTTGAAGAAGCTCTGGCATATGACTCACTGCTGAAGC
ATTTGGATTTAACCCAGGAACAGCTCGCTAAACGGCTCGGAAAAAGCAGGCCTCATATTGCCAACCATTTAAGACTGCTG
ACACTGCCGGAAAGCATCCAGAACCTCATTGCAGAAGGTACGTTATCCATGGGACACGGCAGAACCTTGCTTGGTTTGAA
AAATAAAAACAAGCTTGAACCGCTTGTGAAGAAAGTGGTTGAAGAACAGCTGAACGTCCGTCAGCTTGAGCAGCTTATTC
AGCAGTTAAACAACAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTTCAAGATGTTGTGTTAAAAGAGCGGGAATCG
TATTTGCAAAATTACTTCGGAACAACAGTAAATATTAAGAGACAAAAGAAAAAAGGGAAGATTGAGATTGAGTTTTTCTC
AAATGAAGATCTTGAACGTATCCTAGAACTATTGTCTGAAAGAGAAGCGTAA

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(25-113)

HTH domain found in ParB protein (HTH_ParB)

(164-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.538

91.873

0.382

Multiple sequence alignment