Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   EL133_RS09600 Genome accession   NZ_LR134323
Coordinates   1870869..1871327 (-) Length   152 a.a.
NCBI ID   WP_006738845.1    Uniprot ID   G5KE77
Organism   Streptococcus urinalis strain NCTC13766     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1865869..1876327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL133_RS09585 (NCTC13766_01976) - 1866954..1867310 (+) 357 WP_006740729.1 LPXTG cell wall anchor domain-containing protein -
  EL133_RS09590 (NCTC13766_01977) rcrQ 1867326..1869077 (-) 1752 WP_006739588.1 ABC transporter ATP-binding protein Regulator
  EL133_RS09595 (NCTC13766_01978) rcrP 1869067..1870869 (-) 1803 WP_006739455.1 ABC transporter ATP-binding protein Regulator
  EL133_RS09600 (NCTC13766_01979) rcrR 1870869..1871327 (-) 459 WP_006738845.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  EL133_RS09605 (NCTC13766_01980) - 1871611..1872162 (-) 552 WP_006740374.1 DUF2812 domain-containing protein -
  EL133_RS09610 (NCTC13766_01981) - 1872149..1872478 (-) 330 WP_006740728.1 PadR family transcriptional regulator -
  EL133_RS09615 (NCTC13766_01982) - 1872580..1873419 (-) 840 WP_006739437.1 SDR family oxidoreductase -
  EL133_RS09620 (NCTC13766_01983) - 1873432..1874166 (-) 735 WP_006738834.1 SDR family oxidoreductase -
  EL133_RS09625 (NCTC13766_01984) - 1874282..1875031 (+) 750 WP_006740264.1 AraC family transcriptional regulator -
  EL133_RS09630 (NCTC13766_01985) - 1875094..1876128 (-) 1035 WP_006740203.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17887.58 Da        Isoelectric Point: 8.8617

>NTDB_id=1001706 EL133_RS09600 WP_006738845.1 1870869..1871327(-) (rcrR) [Streptococcus urinalis strain NCTC13766]
MANAMESGFRELKNFINEVEQFIYEEAKHFDVEHLGGPQGFVIMYLLENPDKDLSFKDVESHLKISKSVTSNLIRRMERN
GFVEVQISKKDKRVKHICLTDFGRGKADQLKQYLDHIHDVFLKDITKEDAEITRKVLFTLKTNIKNEMKRRN

Nucleotide


Download         Length: 459 bp        

>NTDB_id=1001706 EL133_RS09600 WP_006738845.1 1870869..1871327(-) (rcrR) [Streptococcus urinalis strain NCTC13766]
ATGGCAAATGCTATGGAATCAGGCTTTCGAGAATTAAAAAATTTTATCAACGAAGTTGAACAATTTATCTATGAAGAGGC
AAAACATTTTGATGTTGAACATCTAGGTGGCCCTCAAGGTTTTGTTATTATGTACTTACTCGAAAATCCTGACAAAGATT
TATCGTTTAAAGATGTCGAATCACATCTGAAAATTTCGAAGTCTGTTACTTCAAATCTTATAAGGCGTATGGAGCGTAAT
GGTTTTGTAGAAGTTCAGATTTCAAAAAAAGATAAACGTGTCAAACACATCTGTTTAACGGATTTTGGAAGAGGAAAAGC
TGACCAGCTTAAGCAATATTTAGATCATATTCATGATGTTTTTCTTAAAGATATTACTAAAGAAGATGCTGAAATTACAA
GGAAGGTACTTTTTACTCTCAAAACAAATATTAAGAATGAAATGAAAAGGAGAAACTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(37-93)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5KE77

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

47.143

92.105

0.434