Detailed information NTG1001679

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: EL133_RS05315
• Genome accession: NZ_LR134323
• Coordinates: 1027216..1028286 (-)
• Length: 356 a.a.
• NCBI ID: WP_006739652.1
• Uniprot ID: G5KFX9
• Organism: Streptococcus urinalis strain NCTC13766
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1022216..1033286

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL133_RS05290 (NCTC13766_01097)	-	1022469..1023953 (+)	1485	WP_006740535.1	hypothetical protein	-
EL133_RS05295 (NCTC13766_01098)	-	1024010..1024708 (+)	699	WP_006738877.1	GntR family transcriptional regulator	-
EL133_RS05300 (NCTC13766_01099)	-	1024794..1025126 (+)	333	WP_006739357.1	putative DNA-binding protein	-
EL133_RS05305 (NCTC13766_01100)	ffh	1025181..1026734 (+)	1554	WP_006740281.1	signal recognition particle protein	-
EL133_RS05310 (NCTC13766_01101)	-	1026791..1027198 (+)	408	WP_006739809.1	YkvA family protein	-
EL133_RS05315 (NCTC13766_01102)	xerS	1027216..1028286 (-)	1071	WP_006739652.1	tyrosine recombinase XerS	Machinery gene
EL133_RS05320 (NCTC13766_01103)	-	1028502..1029302 (-)	801	WP_006739144.1	hypothetical protein	-
EL133_RS05325 (NCTC13766_01104)	-	1029527..1029826 (-)	300	WP_006739359.1	DUF5960 family protein	-
EL133_RS05330 (NCTC13766_01105)	-	1029837..1030193 (-)	357	WP_006738864.1	hypothetical protein	-
EL133_RS05335 (NCTC13766_01106)	-	1030190..1031602 (-)	1413	WP_006740019.1	Y-family DNA polymerase	-
EL133_RS05340 (NCTC13766_01107)	-	1031609..1032295 (-)	687	WP_006739575.1	helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41522.81 Da
• Isoelectric Point: 9.7720

>NTDB_id=1001679 EL133_RS05315 WP_006739652.1 1027216..1028286(-) (xerS) [Streptococcus urinalis strain NCTC13766]
MRRDLLLEKIEDLKTIMPWFVLDYYQSKLTVPYSFTTLYEYLKEYRRFFEWLIDADISKASKIADIDLSTLEHLTKKDME
SFILYLRERPSLNTYSTKQGVSQTTINRTLSALSSLYKYLTEEVEDKNGEPYFYRNVMKKVATKKKKETLAARAENIKQK
LFLGDETMAFLDYVDHDYEVKLSNRAKSSFKKNKERDLAIIALLLASGVRLSEAVNLDMKDLNLNLMVIDVTRKGGKRDS
VNVANFAKPYIENYLKIRKSRYHAEKQDLALFLTEYRGLPNRIDASSIEKMVAKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVMVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide

• Length: 1071 bp

>NTDB_id=1001679 EL133_RS05315 WP_006739652.1 1027216..1028286(-) (xerS) [Streptococcus urinalis strain NCTC13766]
ATGAGACGTGACCTATTACTGGAAAAAATTGAAGATTTAAAGACAATAATGCCATGGTTTGTCCTAGATTATTATCAATC
AAAATTAACTGTTCCTTATAGTTTTACAACCCTATATGAATATCTAAAAGAATACAGACGCTTTTTTGAGTGGTTAATTG
ATGCTGATATATCAAAGGCTTCAAAAATTGCTGACATTGATTTATCTACTTTGGAACATCTGACCAAAAAAGATATGGAA
TCTTTTATATTATATCTTAGAGAAAGACCATCCTTAAATACTTATTCAACTAAACAGGGTGTCTCACAAACAACAATTAA
TCGGACACTTTCTGCATTATCAAGTTTGTATAAATATTTAACAGAAGAGGTTGAAGATAAAAATGGTGAGCCCTACTTCT
ATCGGAATGTCATGAAGAAGGTTGCTACTAAGAAAAAGAAAGAGACTTTGGCAGCAAGAGCTGAAAATATTAAACAAAAG
TTATTTTTAGGTGATGAAACCATGGCTTTTTTAGATTATGTAGATCATGACTATGAGGTAAAATTATCAAATCGTGCTAA
ATCATCCTTTAAGAAAAATAAAGAGAGAGATTTAGCAATAATTGCCTTATTATTAGCTTCTGGTGTGCGTTTATCTGAGG
CAGTCAATCTCGATATGAAAGATTTAAACTTAAACTTAATGGTTATAGATGTCACTCGAAAAGGTGGTAAACGAGATTCA
GTTAATGTTGCTAACTTTGCTAAACCCTATATTGAAAACTATTTAAAAATTAGAAAATCTCGATATCATGCTGAAAAACA
AGACCTGGCACTCTTTTTAACTGAATATAGAGGACTGCCTAATCGTATTGATGCATCAAGTATTGAAAAAATGGTTGCTA
AATACTCTCAGGACTTTAAAATCAGAGTGACACCGCATAAATTACGACATACTCTAGCTACAAGATTATATGATGCAACT
AAATCACAAGTAATGGTAAGTCATCAACTTGGTCATGCTTCTACACAGGTTACAGATCTATATACCCATATTGTCAATGA
TGAGCAAAAAAATGCACTGGATAAACTATAA

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (176-344)

3D structure

• AlphaFold DB: G5KFX9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	81.461	100	0.815