Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EL133_RS04760 | Genome accession | NZ_LR134323 |
| Coordinates | 921098..923197 (-) | Length | 699 a.a. |
| NCBI ID | WP_006738451.1 | Uniprot ID | G5KFH6 |
| Organism | Streptococcus urinalis strain NCTC13766 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 916098..928197
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL133_RS04730 (NCTC13766_00982) | - | 916221..917402 (-) | 1182 | WP_006739294.1 | hydroxymethylglutaryl-CoA synthase | - |
| EL133_RS04735 (NCTC13766_00983) | - | 917591..918430 (+) | 840 | WP_006740238.1 | thymidylate synthase | - |
| EL133_RS04740 (NCTC13766_00984) | - | 918514..919023 (+) | 510 | WP_006738710.1 | dihydrofolate reductase | - |
| EL133_RS04745 (NCTC13766_00985) | - | 919025..919195 (+) | 171 | WP_006739029.1 | hypothetical protein | - |
| EL133_RS04750 (NCTC13766_00986) | clpX | 919230..920456 (+) | 1227 | WP_006740460.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| EL133_RS04755 (NCTC13766_00987) | yihA | 920468..921067 (+) | 600 | WP_006740136.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| EL133_RS04760 (NCTC13766_00988) | clpC | 921098..923197 (-) | 2100 | WP_006738451.1 | AAA family ATPase | Regulator |
| EL133_RS04765 (NCTC13766_00990) | rplJ | 923586..924086 (+) | 501 | WP_006739227.1 | 50S ribosomal protein L10 | - |
| EL133_RS04770 (NCTC13766_00991) | rplL | 924151..924519 (+) | 369 | WP_006739684.1 | 50S ribosomal protein L7/L12 | - |
| EL133_RS04775 (NCTC13766_00992) | - | 924940..925497 (+) | 558 | WP_006740397.1 | dTDP-4-dehydrorhamnose 3,5-epimerase family protein | - |
| EL133_RS04780 (NCTC13766_00993) | - | 926124..926444 (+) | 321 | WP_006738449.1 | hypothetical protein | - |
| EL133_RS04785 (NCTC13766_00994) | - | 926752..927537 (+) | 786 | Protein_935 | glucose-1-dehydrogenase | - |
Sequence
Protein
Download Length: 699 a.a. Molecular weight: 77465.31 Da Isoelectric Point: 4.8301
>NTDB_id=1001676 EL133_RS04760 WP_006738451.1 921098..923197(-) (clpC) [Streptococcus urinalis strain NCTC13766]
MSNYYGKEPFGNMDDIFNQLMGNMGGYNTENRRYLINGKEITPEEFVSFRKTGQLPNQESNHQESKDLKKDGILAKLGTN
LTEQARQNQLDPVIGRNKEIQDTAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIISGDVPAAIKNKEIISIDISGLEA
GTQYRGSFEETIQNLVKEVKDAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTILK
NAALARRFNEVKVNAPSAEDTFHILMGIRNLYEQHHNVVLPDNVLKAAVDYSIQYIPQRSLPDKAIDLIDMTAAHLAAQH
PVTDVRTLESEIQTQKEKQEKAVSEEDFETALSAKGRIEELQSQIDNHTEGQKVTASINDVAESVERLTGVPVSNMGASD
MERLKEIGNRLKGHVIGQNEAVEAVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAVDMFGSKEAIIRLDMS
EYSDRTAVSKLIGTTAGYVGYDDNNNTLTEQVRRNPYSIILLDEIEKADSQVITLLLQVLDDGRLTDGQGNTINFKNTVI
IATSNAGFGNEAIIGNEEKDLKIMDRIAPYFRPEFINRFNGVIEFTHLTKEDLKEIVNLMLDEVNQTIAKKGITLEVKDN
VKDYLIELGYDEAMGVRPLRRVIEQEIRDRITDYYLDHPEVKHLVANMQNNQLQIVEKG
MSNYYGKEPFGNMDDIFNQLMGNMGGYNTENRRYLINGKEITPEEFVSFRKTGQLPNQESNHQESKDLKKDGILAKLGTN
LTEQARQNQLDPVIGRNKEIQDTAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIISGDVPAAIKNKEIISIDISGLEA
GTQYRGSFEETIQNLVKEVKDAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTILK
NAALARRFNEVKVNAPSAEDTFHILMGIRNLYEQHHNVVLPDNVLKAAVDYSIQYIPQRSLPDKAIDLIDMTAAHLAAQH
PVTDVRTLESEIQTQKEKQEKAVSEEDFETALSAKGRIEELQSQIDNHTEGQKVTASINDVAESVERLTGVPVSNMGASD
MERLKEIGNRLKGHVIGQNEAVEAVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAVDMFGSKEAIIRLDMS
EYSDRTAVSKLIGTTAGYVGYDDNNNTLTEQVRRNPYSIILLDEIEKADSQVITLLLQVLDDGRLTDGQGNTINFKNTVI
IATSNAGFGNEAIIGNEEKDLKIMDRIAPYFRPEFINRFNGVIEFTHLTKEDLKEIVNLMLDEVNQTIAKKGITLEVKDN
VKDYLIELGYDEAMGVRPLRRVIEQEIRDRITDYYLDHPEVKHLVANMQNNQLQIVEKG
Nucleotide
Download Length: 2100 bp
>NTDB_id=1001676 EL133_RS04760 WP_006738451.1 921098..923197(-) (clpC) [Streptococcus urinalis strain NCTC13766]
ATGTCAAATTACTATGGAAAAGAACCTTTTGGAAATATGGATGATATTTTTAATCAATTAATGGGAAATATGGGAGGATA
TAATACAGAAAATCGCCGTTATCTTATTAATGGTAAAGAAATAACTCCTGAAGAATTCGTTTCTTTTCGTAAAACTGGTC
AATTACCGAATCAAGAATCTAATCATCAAGAATCTAAAGATCTTAAAAAAGATGGAATACTAGCAAAACTTGGAACAAAT
CTTACAGAGCAAGCTAGACAAAATCAACTTGACCCTGTAATAGGCCGAAATAAAGAGATTCAAGACACTGCTGAAATATT
AGCAAGAAGAACAAAGAATAACCCTGTTCTTGTTGGTGATGCTGGTGTTGGTAAAACTGCTGTTGTAGAAGGATTAGCAC
AAGCCATTATCAGTGGTGATGTTCCTGCTGCAATTAAAAATAAAGAAATCATTTCAATTGATATTTCTGGACTTGAAGCA
GGTACACAATACAGAGGTAGCTTTGAAGAAACCATTCAAAACTTAGTTAAAGAAGTTAAAGATGCTGGGAATATTATTTT
ATTCTTTGATGAAATTCATCAAATATTAGGAGCAGGTTCAACAGGAGGTGATTCTGGTTCTAAAGGATTGGCGGATATTC
TTAAGCCAGCACTTTCAAGAGGTGAATTAACTGTAATTGGGGCAACTACCCAAGATGAATACCGAAACACAATTTTAAAA
AATGCTGCTTTAGCTCGTCGTTTTAACGAAGTCAAAGTTAATGCTCCTTCTGCAGAAGATACCTTTCATATCTTGATGGG
GATCCGTAATCTCTATGAACAACACCATAACGTAGTTCTTCCAGATAATGTTTTAAAAGCAGCTGTTGACTATTCTATAC
AGTATATACCACAACGCAGTTTACCTGATAAAGCTATTGATTTAATTGATATGACTGCTGCCCATTTAGCAGCTCAACAT
CCTGTTACGGATGTCAGAACCCTTGAGTCTGAAATTCAAACACAAAAAGAAAAACAAGAAAAAGCTGTATCTGAAGAAGA
CTTTGAAACTGCATTAAGTGCAAAAGGCCGTATCGAAGAATTACAAAGTCAAATTGATAATCACACTGAAGGTCAAAAAG
TGACTGCATCCATTAATGATGTTGCTGAATCTGTAGAACGCTTAACTGGAGTACCTGTTTCAAATATGGGTGCTAGTGAC
ATGGAAAGATTGAAAGAAATTGGAAATCGTTTAAAAGGTCATGTTATTGGACAAAATGAAGCTGTTGAAGCCGTTTCTAG
AGCTATTAGACGAAATCGAGCAGGTTTTGATGATGGAAATAGACCTATTGGATCATTTTTATTCGTTGGCCCAACTGGAG
TCGGAAAAACAGAATTAGCAAAACAACTTGCCGTTGACATGTTCGGCTCAAAAGAAGCTATTATACGATTAGACATGTCT
GAATATAGTGATCGTACTGCCGTTTCAAAATTGATTGGTACAACTGCTGGCTATGTTGGTTATGATGATAATAATAACAC
TCTAACTGAACAAGTCCGCCGTAATCCTTATTCAATCATTTTACTTGATGAAATTGAAAAAGCAGATTCTCAAGTTATTA
CACTACTTCTTCAAGTTCTAGATGACGGTAGACTAACTGATGGCCAAGGTAATACTATTAATTTCAAGAATACCGTTATC
ATCGCCACGTCAAATGCTGGTTTTGGCAATGAAGCCATTATCGGAAATGAAGAAAAAGATCTCAAAATAATGGATCGTAT
TGCACCATACTTCAGACCAGAATTTATTAATCGTTTTAATGGTGTTATTGAATTCACACATTTAACAAAAGAAGATTTAA
AAGAAATTGTTAACTTAATGTTAGATGAAGTTAATCAAACCATTGCTAAAAAAGGAATTACACTTGAAGTTAAAGATAAT
GTTAAAGATTACCTCATTGAATTAGGTTATGACGAAGCTATGGGGGTCAGACCACTTAGAAGAGTTATTGAACAAGAAAT
TCGAGATCGTATTACTGATTATTATTTAGATCATCCTGAAGTTAAGCACTTAGTAGCAAACATGCAAAATAACCAACTAC
AAATTGTTGAAAAAGGATAA
ATGTCAAATTACTATGGAAAAGAACCTTTTGGAAATATGGATGATATTTTTAATCAATTAATGGGAAATATGGGAGGATA
TAATACAGAAAATCGCCGTTATCTTATTAATGGTAAAGAAATAACTCCTGAAGAATTCGTTTCTTTTCGTAAAACTGGTC
AATTACCGAATCAAGAATCTAATCATCAAGAATCTAAAGATCTTAAAAAAGATGGAATACTAGCAAAACTTGGAACAAAT
CTTACAGAGCAAGCTAGACAAAATCAACTTGACCCTGTAATAGGCCGAAATAAAGAGATTCAAGACACTGCTGAAATATT
AGCAAGAAGAACAAAGAATAACCCTGTTCTTGTTGGTGATGCTGGTGTTGGTAAAACTGCTGTTGTAGAAGGATTAGCAC
AAGCCATTATCAGTGGTGATGTTCCTGCTGCAATTAAAAATAAAGAAATCATTTCAATTGATATTTCTGGACTTGAAGCA
GGTACACAATACAGAGGTAGCTTTGAAGAAACCATTCAAAACTTAGTTAAAGAAGTTAAAGATGCTGGGAATATTATTTT
ATTCTTTGATGAAATTCATCAAATATTAGGAGCAGGTTCAACAGGAGGTGATTCTGGTTCTAAAGGATTGGCGGATATTC
TTAAGCCAGCACTTTCAAGAGGTGAATTAACTGTAATTGGGGCAACTACCCAAGATGAATACCGAAACACAATTTTAAAA
AATGCTGCTTTAGCTCGTCGTTTTAACGAAGTCAAAGTTAATGCTCCTTCTGCAGAAGATACCTTTCATATCTTGATGGG
GATCCGTAATCTCTATGAACAACACCATAACGTAGTTCTTCCAGATAATGTTTTAAAAGCAGCTGTTGACTATTCTATAC
AGTATATACCACAACGCAGTTTACCTGATAAAGCTATTGATTTAATTGATATGACTGCTGCCCATTTAGCAGCTCAACAT
CCTGTTACGGATGTCAGAACCCTTGAGTCTGAAATTCAAACACAAAAAGAAAAACAAGAAAAAGCTGTATCTGAAGAAGA
CTTTGAAACTGCATTAAGTGCAAAAGGCCGTATCGAAGAATTACAAAGTCAAATTGATAATCACACTGAAGGTCAAAAAG
TGACTGCATCCATTAATGATGTTGCTGAATCTGTAGAACGCTTAACTGGAGTACCTGTTTCAAATATGGGTGCTAGTGAC
ATGGAAAGATTGAAAGAAATTGGAAATCGTTTAAAAGGTCATGTTATTGGACAAAATGAAGCTGTTGAAGCCGTTTCTAG
AGCTATTAGACGAAATCGAGCAGGTTTTGATGATGGAAATAGACCTATTGGATCATTTTTATTCGTTGGCCCAACTGGAG
TCGGAAAAACAGAATTAGCAAAACAACTTGCCGTTGACATGTTCGGCTCAAAAGAAGCTATTATACGATTAGACATGTCT
GAATATAGTGATCGTACTGCCGTTTCAAAATTGATTGGTACAACTGCTGGCTATGTTGGTTATGATGATAATAATAACAC
TCTAACTGAACAAGTCCGCCGTAATCCTTATTCAATCATTTTACTTGATGAAATTGAAAAAGCAGATTCTCAAGTTATTA
CACTACTTCTTCAAGTTCTAGATGACGGTAGACTAACTGATGGCCAAGGTAATACTATTAATTTCAAGAATACCGTTATC
ATCGCCACGTCAAATGCTGGTTTTGGCAATGAAGCCATTATCGGAAATGAAGAAAAAGATCTCAAAATAATGGATCGTAT
TGCACCATACTTCAGACCAGAATTTATTAATCGTTTTAATGGTGTTATTGAATTCACACATTTAACAAAAGAAGATTTAA
AAGAAATTGTTAACTTAATGTTAGATGAAGTTAATCAAACCATTGCTAAAAAAGGAATTACACTTGAAGTTAAAGATAAT
GTTAAAGATTACCTCATTGAATTAGGTTATGACGAAGCTATGGGGGTCAGACCACTTAGAAGAGTTATTGAACAAGAAAT
TCGAGATCGTATTACTGATTATTATTTAGATCATCCTGAAGTTAAGCACTTAGTAGCAAACATGCAAAATAACCAACTAC
AAATTGTTGAAAAAGGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
47.143 |
100 |
0.472 |
| clpE | Streptococcus mutans UA159 |
46.562 |
99.857 |
0.465 |
| clpE | Streptococcus pneumoniae TIGR4 |
48.957 |
89.127 |
0.436 |
| clpE | Streptococcus pneumoniae Rx1 |
48.957 |
89.127 |
0.436 |
| clpE | Streptococcus pneumoniae D39 |
48.957 |
89.127 |
0.436 |
| clpE | Streptococcus pneumoniae R6 |
48.957 |
89.127 |
0.436 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.353 |
89.27 |
0.405 |
| clpC | Streptococcus pneumoniae Rx1 |
43.186 |
87.124 |
0.376 |
| clpC | Streptococcus pneumoniae D39 |
43.186 |
87.124 |
0.376 |
| clpC | Streptococcus pneumoniae TIGR4 |
43.021 |
87.124 |
0.375 |
| clpC | Streptococcus thermophilus LMD-9 |
42.071 |
88.412 |
0.372 |
| clpC | Streptococcus mutans UA159 |
40.28 |
91.989 |
0.371 |
| clpC | Streptococcus thermophilus LMG 18311 |
41.909 |
88.412 |
0.371 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
40.124 |
91.989 |
0.369 |