Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EL133_RS04655 Genome accession   NZ_LR134323
Coordinates   899888..901660 (+) Length   590 a.a.
NCBI ID   WP_006738789.1    Uniprot ID   G5KFF3
Organism   Streptococcus urinalis strain NCTC13766     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 894888..906660
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL133_RS04645 (NCTC13766_00963) - 896062..897930 (+) 1869 WP_006739790.1 ABC-F family ATP-binding cassette domain-containing protein -
  EL133_RS04650 (NCTC13766_00964) rcrP 898139..899878 (+) 1740 WP_006740380.1 ABC transporter ATP-binding protein Regulator
  EL133_RS04655 (NCTC13766_00965) rcrQ 899888..901660 (+) 1773 WP_006738789.1 ABC transporter ATP-binding protein Regulator
  EL133_RS04660 (NCTC13766_00966) gdhA 901749..903098 (+) 1350 WP_006738517.1 NADP-specific glutamate dehydrogenase -
  EL133_RS04665 (NCTC13766_00967) - 903162..903572 (+) 411 WP_006739815.1 peptide deformylase -
  EL133_RS04670 (NCTC13766_00968) - 903676..904308 (+) 633 WP_006739458.1 GTP pyrophosphokinase family protein -
  EL133_RS04675 (NCTC13766_00969) - 904312..904980 (+) 669 Protein_912 response regulator transcription factor -
  EL133_RS04680 - 904993..906224 (+) 1232 Protein_913 sensor histidine kinase -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 66682.30 Da        Isoelectric Point: 5.2610

>NTDB_id=1001674 EL133_RS04655 WP_006738789.1 899888..901660(+) (rcrQ) [Streptococcus urinalis strain NCTC13766]
MTEKNVFKRLWSYLKNYRLSLFLAVFLKILSALMSVLEPFVLGLAITELTKNLLDMAKGIDGASINKTYIFWVLVIYLIR
ALINELGSFGSNYFMTRAVQSSIRDLRQDLNQKINQIPISYFDKHQFGDMLGRFTSDVEAVSNALQQSFLQIVNAIFTII
LVVSMVLYLNFKLAIVVIMTVPVTYFVAQFILKKSQPYFKKQANILGAMNGYVQENLSGFNILKLYGREEASEEEFYQIT
KDIQEIGFKASFISGIMMPILNFISDSVYMIVALIGGLQVISGQMTIGNMQAFVQYIWQISQPIQVITQLASVLQSAKSS
LERIFQVLDEPNEINEVSESLKQDLSGQVSFNNVDFQYVEGKPLIRDFTLDVKPGEMIAIVGPTGAGKTTLINLLMRFYD
VTKGSITVDGHDIRNLSRQEYRQQFGMVLQDAWLYEGSINENLRFGKLDASDEEIVEAAKAANVDHFIRTLPNGYQMEMN
QESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKVLMEGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHQTLLESKGFYYDLYMSQFSNSQA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=1001674 EL133_RS04655 WP_006738789.1 899888..901660(+) (rcrQ) [Streptococcus urinalis strain NCTC13766]
ATGACAGAAAAAAATGTATTTAAACGTCTATGGTCTTATTTAAAAAATTATCGTCTCTCTCTCTTTTTAGCTGTTTTTCT
AAAAATATTAAGTGCTTTAATGAGTGTTTTAGAACCCTTTGTTTTAGGGCTTGCTATTACTGAGTTAACCAAAAATTTAC
TGGATATGGCTAAAGGAATAGATGGCGCTTCAATTAACAAAACCTATATCTTTTGGGTATTAGTCATTTATCTAATTAGG
GCACTAATTAATGAGCTAGGATCTTTTGGTTCAAACTATTTTATGACAAGAGCAGTTCAATCAAGTATTCGTGATTTAAG
ACAAGATTTGAATCAAAAAATTAATCAAATTCCAATTTCGTATTTTGATAAACATCAATTTGGAGATATGTTAGGTCGTT
TCACATCTGATGTAGAAGCTGTCTCAAATGCCTTACAACAGTCTTTTTTACAAATTGTTAATGCTATTTTTACGATTATT
TTAGTTGTCAGTATGGTTTTATACCTCAATTTTAAATTGGCTATTGTTGTCATCATGACTGTTCCAGTAACTTATTTTGT
AGCTCAATTTATTTTGAAAAAATCACAACCATACTTTAAAAAGCAAGCTAATATTTTAGGAGCAATGAATGGATATGTGC
AAGAAAATTTGTCTGGTTTTAATATCTTAAAATTATATGGACGTGAAGAAGCATCTGAAGAAGAGTTTTATCAAATCACG
AAAGATATACAAGAAATTGGGTTTAAAGCCAGTTTTATCTCTGGTATAATGATGCCAATTTTGAATTTTATTTCAGATTC
TGTCTACATGATTGTTGCGCTTATAGGTGGTCTACAAGTTATTTCAGGACAAATGACAATTGGTAATATGCAAGCTTTTG
TACAATATATTTGGCAAATCAGTCAACCCATTCAAGTTATTACCCAATTAGCATCAGTTTTACAGAGTGCAAAGTCATCT
CTAGAAAGAATATTTCAAGTCCTTGATGAACCTAACGAAATCAATGAAGTTAGTGAATCATTAAAACAAGATTTGTCAGG
TCAGGTTTCTTTCAATAACGTTGACTTTCAATATGTTGAAGGAAAACCATTAATTCGTGATTTTACTTTAGACGTTAAGC
CTGGTGAGATGATTGCTATTGTTGGTCCTACTGGAGCTGGTAAAACAACTTTAATTAACTTATTAATGCGTTTTTATGAT
GTCACAAAAGGTTCGATTACAGTTGATGGCCACGATATTAGAAATCTTTCTCGTCAGGAATATCGTCAACAATTTGGTAT
GGTATTGCAAGATGCTTGGCTATACGAAGGTAGTATCAATGAAAATTTACGCTTTGGGAAATTAGATGCAAGTGATGAAG
AAATTGTAGAAGCAGCTAAAGCAGCCAATGTTGATCATTTTATTAGAACCTTACCAAATGGTTATCAAATGGAGATGAAT
CAAGAATCAAGTAATATTTCTTTAGGTCAAAAACAATTGTTAACAATTGCTAGAGCTTTGCTGGCTGATCCGAAAATTTT
GATACTTGACGAAGCAACGTCTTCAGTTGATACTCGACTGGAATTATTGATACAAAAAGCAATGAAAGTTTTAATGGAAG
GTAGAACTAGTTTTGTTATTGCTCATCGATTGTCAACGATTCAAGAAGCTGATAAGATTTTAGTATTAAAAGATGGCCAA
ATAATTGAGCAAGGGAATCATCAGACATTACTTGAATCTAAAGGTTTTTATTATGATTTGTATATGAGTCAATTTTCAAA
CAGTCAAGCATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(21-303)

ABC transporter (ABC_tran)

(366-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5KFF3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

43.729

100

0.437

Multiple sequence alignment