Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EL133_RS04650 Genome accession   NZ_LR134323
Coordinates   898139..899878 (+) Length   579 a.a.
NCBI ID   WP_006740380.1    Uniprot ID   G5KFF2
Organism   Streptococcus urinalis strain NCTC13766     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 893139..904878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL133_RS04630 (NCTC13766_00960) - 893228..894079 (+) 852 WP_006739552.1 DegV family protein -
  EL133_RS04635 (NCTC13766_00961) dapB 894094..894861 (+) 768 WP_006740139.1 4-hydroxy-tetrahydrodipicolinate reductase -
  EL133_RS04640 (NCTC13766_00962) - 894858..896069 (+) 1212 WP_006738615.1 CCA tRNA nucleotidyltransferase -
  EL133_RS04645 (NCTC13766_00963) - 896062..897930 (+) 1869 WP_006739790.1 ABC-F family ATP-binding cassette domain-containing protein -
  EL133_RS04650 (NCTC13766_00964) rcrP 898139..899878 (+) 1740 WP_006740380.1 ABC transporter ATP-binding protein Regulator
  EL133_RS04655 (NCTC13766_00965) rcrQ 899888..901660 (+) 1773 WP_006738789.1 ABC transporter ATP-binding protein Regulator
  EL133_RS04660 (NCTC13766_00966) gdhA 901749..903098 (+) 1350 WP_006738517.1 NADP-specific glutamate dehydrogenase -
  EL133_RS04665 (NCTC13766_00967) - 903162..903572 (+) 411 WP_006739815.1 peptide deformylase -
  EL133_RS04670 (NCTC13766_00968) - 903676..904308 (+) 633 WP_006739458.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 65179.69 Da        Isoelectric Point: 6.7816

>NTDB_id=1001673 EL133_RS04650 WP_006740380.1 898139..899878(+) (rcrP) [Streptococcus urinalis strain NCTC13766]
MGLIWNYLKRKPKFLLMNLFGALLFVVVNLGLPTILARMIDDGVTKNNKQALYFWAIIMFLIVLSGAVGRLVLSYASSRL
TTTMVKELRDDMYRKLQDYSHSEYEKIGVSSLVTRMTSDAFVLMQFAEMTLRMGLVTPLMMIFSVIMILVTSPSLAWIVA
VAIPFLIIVVVYVAVQTKPLSEKQQSTLDKINQFVRENLTGLRVIRAFAREDFQENKFNSENETYQKTSSHLFILTGITE
PLFVQIIVAMIVSIVWFALDPLAKGNYQIGNLVAFIEYSFHALFSFLMFANLFTMYPKMAVSSSRIREVLNMPISISKNE
DGVTETKTKGYLEFDSVTFAYPGETESPVLHDISFKTKPGETIAFIGSTGSGKSSLVNLIPRFFDVTLGRILVDGVDVRD
FNLKALRQKIGFIPQKSLLFTGTIEENLKFGKSDANIEELDQAADVSQAKEFIESREKRYQTHLAEAGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYKTDAELRRRLKEVTENATVLIVAQRVGTIMDADQIIVLDEGEIVGRGTHEELMISND
IYREIANSQLNNQSLTKEG

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=1001673 EL133_RS04650 WP_006740380.1 898139..899878(+) (rcrP) [Streptococcus urinalis strain NCTC13766]
ATGGGGTTAATTTGGAATTATTTAAAGCGTAAACCAAAATTTTTATTGATGAATCTTTTTGGTGCTTTATTATTCGTTGT
TGTTAATCTTGGATTACCAACAATTTTGGCTCGTATGATTGATGATGGTGTTACTAAGAATAACAAACAAGCTTTGTATT
TTTGGGCTATAATCATGTTTTTAATTGTTTTATCAGGAGCTGTTGGAAGGTTAGTTTTATCTTATGCTTCTAGCCGATTA
ACAACCACTATGGTAAAAGAGCTTCGTGATGACATGTATCGTAAATTACAGGATTATTCTCATTCTGAATATGAAAAAAT
TGGAGTCTCTTCTTTAGTAACAAGAATGACAAGTGATGCTTTTGTCTTGATGCAATTTGCTGAAATGACTTTGAGAATGG
GCCTAGTAACACCACTCATGATGATTTTCTCAGTTATTATGATACTTGTAACTAGTCCATCTTTAGCTTGGATTGTAGCT
GTTGCTATTCCATTTTTGATTATTGTAGTTGTTTATGTTGCTGTTCAGACTAAACCTTTATCTGAGAAGCAACAGTCAAC
TTTAGATAAAATTAACCAATTTGTTAGAGAGAATTTGACTGGACTTCGTGTTATTAGAGCATTTGCTCGAGAAGACTTTC
AGGAAAATAAATTTAATAGTGAGAATGAAACTTATCAAAAAACATCTAGTCATCTCTTTATCTTAACAGGGATAACAGAA
CCATTATTTGTACAGATTATCGTTGCTATGATTGTGTCAATTGTTTGGTTTGCACTAGATCCTTTAGCAAAGGGCAATTA
TCAAATTGGTAATTTAGTTGCTTTTATTGAATACAGTTTCCATGCTTTATTCTCATTTTTAATGTTTGCTAATCTCTTTA
CCATGTATCCTAAAATGGCAGTCTCAAGCTCTCGTATTAGAGAAGTTTTAAATATGCCCATTTCCATTTCAAAAAATGAA
GATGGGGTTACTGAAACAAAAACAAAAGGCTATTTAGAATTTGATAGTGTCACATTTGCTTATCCAGGTGAGACTGAAAG
TCCAGTTTTACATGATATTTCATTCAAAACAAAACCTGGAGAAACCATTGCCTTCATTGGTTCGACTGGTTCTGGAAAAT
CATCTTTAGTTAATTTGATACCAAGATTCTTTGATGTGACGTTAGGCCGAATATTAGTAGATGGTGTGGATGTCCGAGAT
TTTAATCTAAAGGCTTTACGTCAAAAAATTGGTTTTATTCCGCAAAAGTCTTTACTTTTTACCGGAACTATTGAGGAAAA
TTTAAAATTTGGTAAAAGTGATGCTAATATTGAGGAATTAGACCAGGCTGCAGATGTCTCACAAGCTAAAGAGTTTATTG
AGAGTCGTGAGAAAAGATATCAAACCCATTTAGCTGAAGCTGGTAGTAACCTTTCAGGTGGTCAAAAACAACGATTATCA
ATTGCACGGGCTGTGGTGAAAAAACCAGATATTTACATTTTTGATGATTCCTTTTCTGCACTTGATTACAAGACTGATGC
TGAATTGCGTCGCCGTCTAAAAGAAGTAACCGAAAATGCAACGGTTCTAATCGTTGCCCAAAGGGTTGGTACGATCATGG
ATGCCGATCAAATAATTGTTCTAGACGAAGGCGAAATTGTTGGGCGTGGAACGCATGAAGAATTAATGATTTCCAACGAT
ATTTATAGAGAAATTGCAAACTCTCAATTAAATAATCAAAGTTTAACGAAAGAAGGTTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-280)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5KFF2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.377

91.537

0.37

Multiple sequence alignment